Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS12245

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,729,899	+		HER17_RS12240	0.13	-0.3
2,730,029	-		HER17_RS12240	0.26	-0.1
2,730,095	+		HER17_RS12240	0.32	-0.4
2,730,096	-		HER17_RS12240	0.32	-0.4
2,730,127	+		HER17_RS12240	0.35	-1.0
2,730,127	+		HER17_RS12240	0.35	+0.3
2,730,128	-		HER17_RS12240	0.35	+0.1
2,730,131	+		HER17_RS12240	0.35	+0.5
2,730,131	+		HER17_RS12240	0.35	+0.4
2,730,132	-		HER17_RS12240	0.35	-0.1
2,730,132	-		HER17_RS12240	0.35	+0.0
2,730,197	+		HER17_RS12240	0.41	-0.8
2,730,230	-		HER17_RS12240	0.44	-0.8
2,730,300	+		HER17_RS12240	0.51	-0.4
2,730,300	+		HER17_RS12240	0.51	+1.2
2,730,300	+		HER17_RS12240	0.51	-0.1
2,730,301	-		HER17_RS12240	0.51	-1.3
2,730,301	-		HER17_RS12240	0.51	-0.2
2,730,427	-		HER17_RS12240	0.63	-1.3
2,730,427	-		HER17_RS12240	0.63	+0.1
2,730,427	-		HER17_RS12240	0.63	-0.1
2,730,427	-		HER17_RS12240	0.63	-0.3
2,730,428	+		HER17_RS12240	0.63	+0.1
2,730,428	+		HER17_RS12240	0.63	+1.0
2,730,429	-		HER17_RS12240	0.63	-0.2
2,730,429	-		HER17_RS12240	0.63	-1.1
2,730,451	-		HER17_RS12240	0.65	+1.0
2,730,457	+		HER17_RS12240	0.66	-0.7
2,730,488	-		HER17_RS12240	0.69	-1.1
2,730,674	+		HER17_RS12240	0.86	-0.2
2,730,688	+		HER17_RS12240	0.87	+0.2
2,730,706	+		HER17_RS12240	0.89	+0.7
2,730,706	+		HER17_RS12240	0.89	+0.2
2,730,794	-				+0.9
2,730,875	-				-0.3
2,730,897	+		HER17_RS12245	0.13	+0.5
2,730,898	-		HER17_RS12245	0.13	-0.7
2,730,898	-		HER17_RS12245	0.13	-0.1
2,730,908	+		HER17_RS12245	0.14	+0.0
2,731,234	+		HER17_RS12245	0.70	-0.4
2,731,235	-		HER17_RS12245	0.70	-0.7
2,731,255	+		HER17_RS12245	0.73	-0.5
2,731,255	+		HER17_RS12245	0.73	-0.4
2,731,255	+		HER17_RS12245	0.73	+0.8
2,731,255	+		HER17_RS12245	0.73	+0.2
2,731,255	+		HER17_RS12245	0.73	+1.6
2,731,256	-		HER17_RS12245	0.73	+0.0
2,731,256	-		HER17_RS12245	0.73	-0.2
2,731,256	-		HER17_RS12245	0.73	+0.3
2,731,256	-		HER17_RS12245	0.73	+0.7
2,731,412	-				-0.5
2,731,436	+				+0.7
2,731,436	+				-1.1
2,731,436	+				+0.0
2,731,437	-				-0.7
2,731,613	+		HER17_RS12250	0.26	+0.5
2,731,694	+		HER17_RS12250	0.37	+0.2
2,731,694	+		HER17_RS12250	0.37	+0.4
2,731,694	+		HER17_RS12250	0.37	-1.0
2,731,695	-		HER17_RS12250	0.37	-0.7
2,731,898	-		HER17_RS12250	0.65	+0.7
2,731,898	-		HER17_RS12250	0.65	+0.0
2,731,898	-		HER17_RS12250	0.65	-0.1
2,731,979	-		HER17_RS12250	0.76	+1.0
2,732,201	-				+1.6
2,732,286	+		HER17_RS12255	0.19	+0.6
2,732,291	+		HER17_RS12255	0.20	+0.3
2,732,291	+		HER17_RS12255	0.20	+0.7
2,732,325	-		HER17_RS12255	0.24	-0.6