Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS11980

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,659,856	-		HER17_RS11975	0.41	+0.6
2,659,931	+		HER17_RS11975	0.45	-0.1
2,659,932	-		HER17_RS11975	0.45	+0.4
2,659,965	+		HER17_RS11975	0.47	-0.1
2,659,965	+		HER17_RS11975	0.47	-0.3
2,659,966	-		HER17_RS11975	0.47	+0.3
2,659,972	+		HER17_RS11975	0.48	+1.5
2,659,972	+		HER17_RS11975	0.48	+0.5
2,659,972	+		HER17_RS11975	0.48	+0.6
2,659,972	+		HER17_RS11975	0.48	-1.9
2,659,972	+		HER17_RS11975	0.48	-0.9
2,659,973	-		HER17_RS11975	0.48	-0.6
2,659,973	-		HER17_RS11975	0.48	+0.2
2,659,973	-		HER17_RS11975	0.48	-0.3
2,659,973	-		HER17_RS11975	0.48	-0.1
2,659,974	+		HER17_RS11975	0.48	-0.5
2,659,974	+		HER17_RS11975	0.48	-0.4
2,659,975	-		HER17_RS11975	0.48	-0.0
2,659,983	+		HER17_RS11975	0.48	+0.6
2,659,983	+		HER17_RS11975	0.48	-0.0
2,659,984	-		HER17_RS11975	0.48	-0.9
2,659,999	+		HER17_RS11975	0.49	-0.4
2,660,000	-		HER17_RS11975	0.49	-0.9
2,660,000	-		HER17_RS11975	0.49	-0.1
2,660,147	-		HER17_RS11975	0.58	-0.2
2,660,147	-		HER17_RS11975	0.58	-0.0
2,660,206	-		HER17_RS11975	0.62	+1.3
2,660,218	+		HER17_RS11975	0.63	+0.2
2,660,218	+		HER17_RS11975	0.63	+0.3
2,660,342	+		HER17_RS11975	0.70	+0.6
2,660,342	+		HER17_RS11975	0.70	+0.4
2,660,343	-		HER17_RS11975	0.70	+0.2
2,660,343	-		HER17_RS11975	0.70	-1.6
2,660,345	+		HER17_RS11975	0.70	-0.2
2,660,346	-		HER17_RS11975	0.70	-0.7
2,660,413	+		HER17_RS11975	0.75	+0.1
2,660,438	+		HER17_RS11975	0.76	-0.8
2,660,448	+		HER17_RS11975	0.77	+0.1
2,660,549	-		HER17_RS11975	0.83	+0.1
2,660,603	+		HER17_RS11975	0.86	-0.6
2,660,693	-				+0.5
2,660,721	+				+0.1
2,660,798	+				+0.1
2,660,799	-				-0.3
2,660,819	-				-0.2
2,660,844	-				-0.8
2,660,958	-		HER17_RS11980	0.11	+0.3
2,661,052	+		HER17_RS11980	0.19	+0.9
2,661,052	+		HER17_RS11980	0.19	+0.9
2,661,053	-		HER17_RS11980	0.19	+0.1
2,661,053	-		HER17_RS11980	0.19	-1.1
2,661,053	-		HER17_RS11980	0.19	-0.0
2,661,123	+		HER17_RS11980	0.25	-0.1
2,661,123	+		HER17_RS11980	0.25	-0.9
2,661,123	+		HER17_RS11980	0.25	-0.9
2,661,124	-		HER17_RS11980	0.25	+0.3
2,661,124	-		HER17_RS11980	0.25	+0.7
2,661,188	-		HER17_RS11980	0.30	-0.3
2,661,188	-		HER17_RS11980	0.30	+0.7
2,661,292	+		HER17_RS11980	0.38	+0.5
2,661,292	+		HER17_RS11980	0.38	+0.8
2,661,292	+		HER17_RS11980	0.38	-0.4
2,661,292	+		HER17_RS11980	0.38	+0.9
2,661,293	-		HER17_RS11980	0.38	+0.4
2,661,293	-		HER17_RS11980	0.38	+0.0
2,661,293	-		HER17_RS11980	0.38	-0.7
2,661,293	-		HER17_RS11980	0.38	-0.4
2,661,293	-		HER17_RS11980	0.38	-0.5
2,661,293	-		HER17_RS11980	0.38	-0.4
2,661,293	-		HER17_RS11980	0.38	+0.1
2,661,309	-		HER17_RS11980	0.40	+0.7
2,661,384	+		HER17_RS11980	0.46	+0.5
2,661,569	+		HER17_RS11980	0.60	-0.1
2,661,627	+		HER17_RS11980	0.65	+0.5
2,661,782	+		HER17_RS11980	0.78	-0.4
2,661,838	-		HER17_RS11980	0.82	+1.1
2,661,846	-		HER17_RS11980	0.83	-0.7
2,661,846	-		HER17_RS11980	0.83	-0.2
2,661,875	+		HER17_RS11980	0.85	+0.3
2,661,907	-		HER17_RS11980	0.88	-0.9
2,661,984	-				-0.2
2,662,014	+				+0.5
2,662,026	+				+0.5
2,662,061	+				-1.4
2,662,061	+				-0.1
2,662,061	+				-0.6
2,662,061	+				+1.4
2,662,061	+				-0.2
2,662,061	+				-0.4
2,662,061	+				-0.3
2,662,062	-				+0.3
2,662,062	-				-0.2
2,662,063	+				-0.1
2,662,063	+				+0.4
2,662,063	+				-0.6
2,662,063	+				-1.0
2,662,063	+				+1.0
2,662,063	+				-0.2
2,662,064	-				-0.5
2,662,064	-				+0.7
2,662,094	+				+0.4
2,662,182	+				+0.7
2,662,183	-				-0.1
2,662,194	+				-0.5
2,662,194	+				+0.7
2,662,195	-				+0.6
2,662,195	-				-0.5
2,662,195	-				+0.1
2,662,199	+				+0.4
2,662,199	+				+0.0
2,662,240	-				+0.7
2,662,297	+				-0.8
2,662,316	+				-2.0
2,662,316	+				+0.4
2,662,328	+				+0.8
2,662,328	+				-0.8
2,662,355	-				-0.1
2,662,435	-				+0.3
2,662,549	-		HER17_RS11985	0.10	-1.1
2,662,567	+		HER17_RS11985	0.11	-0.1
2,662,572	+		HER17_RS11985	0.11	+0.0
2,662,573	-		HER17_RS11985	0.11	-0.4
2,662,573	-		HER17_RS11985	0.11	+0.3
2,662,573	-		HER17_RS11985	0.11	-0.3
2,662,693	+		HER17_RS11985	0.18	+1.4
2,662,693	+		HER17_RS11985	0.18	-0.1
2,662,693	+		HER17_RS11985	0.18	-0.6
2,662,694	-		HER17_RS11985	0.18	+0.3
2,662,697	-		HER17_RS11985	0.18	-0.7
2,662,807	+		HER17_RS11985	0.24	+0.4
2,662,997	-		HER17_RS11985	0.33	+0.0