Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS11700

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,599,412	-				-3.8
2,599,434	-				-1.2
2,599,459	+				-1.6
2,599,497	-				-2.0
2,599,515	-				-2.9
2,599,524	-				-2.4
2,599,579	-				-0.3
2,599,609	-				-0.4
2,599,823	+		HER17_RS11695	0.35	-1.5
2,600,013	-		HER17_RS11695	0.60	+0.1
2,600,091	+		HER17_RS11695	0.71	-2.8
2,600,092	-		HER17_RS11695	0.71	+0.4
2,600,122	+		HER17_RS11695	0.75	-2.6
2,600,122	+		HER17_RS11695	0.75	-1.3
2,600,122	+		HER17_RS11695	0.75	-3.3
2,600,123	-		HER17_RS11695	0.75	-0.3
2,600,142	+		HER17_RS11695	0.77	-1.9
2,600,142	+		HER17_RS11695	0.77	-2.6
2,600,142	+		HER17_RS11695	0.77	-1.4
2,600,143	-		HER17_RS11695	0.78	-0.2
2,600,143	-		HER17_RS11695	0.78	+0.0
2,600,283	-				-0.2
2,600,283	-				+0.2
2,600,285	+				-2.3
2,600,297	+				-3.5
2,600,297	+				-1.7
2,600,298	-				-0.4
2,600,298	-				-0.0
2,600,298	-				-1.3
2,600,327	-				+1.1
2,600,327	-				+1.2
2,600,370	-				-0.0
2,600,370	-				-0.1
2,600,370	-				+0.3
2,600,370	-				+0.0
2,600,372	-				+1.7
2,600,466	+		HER17_RS11700	0.14	+0.1
2,600,467	-		HER17_RS11700	0.14	+0.5
2,600,613	-		HER17_RS11700	0.43	+1.6
2,600,613	-		HER17_RS11700	0.43	+0.1
2,600,679	+		HER17_RS11700	0.56	+0.5
2,600,680	-		HER17_RS11700	0.56	-0.4
2,600,699	+		HER17_RS11700	0.60	+0.0
2,600,761	+		HER17_RS11700	0.72	-0.2
2,600,777	+		HER17_RS11700	0.75	+0.3
2,600,810	+		HER17_RS11700	0.81	+0.4
2,600,810	+		HER17_RS11700	0.81	-1.8
2,600,811	-		HER17_RS11700	0.82	+1.1
2,600,832	-		HER17_RS11700	0.86	+0.5
2,600,897	+				-1.6
2,600,898	-				+0.3
2,600,898	-				-1.2
2,600,908	+				-0.2
2,600,908	+				+0.5
2,600,909	-				+0.2
2,601,018	-				+0.3
2,601,018	-				-0.2
2,601,058	-				-1.4
2,601,062	+				-0.0
2,601,081	+				-1.1
2,601,081	+				+0.1
2,601,097	+				+0.2
2,601,098	-				+0.3
2,601,109	-				-0.1
2,601,119	+				+0.7
2,601,119	+				-0.6
2,601,120	-				+0.0
2,601,128	+				+0.7
2,601,129	-				+0.3
2,601,138	+				-0.2
2,601,138	+				+0.9
2,601,138	+				+0.4
2,601,139	-				+0.1
2,601,139	-				-0.4
2,601,152	+				-0.8
2,601,199	+				-1.0
2,601,199	+				+0.2
2,601,200	-				+0.4
2,601,433	-		HER17_RS11705	0.19	-0.1
2,601,663	+		HER17_RS11705	0.37	+0.2
2,601,666	+		HER17_RS11705	0.38	-0.3
2,601,666	+		HER17_RS11705	0.38	-0.9
2,601,667	-		HER17_RS11705	0.38	+0.1
2,601,697	+		HER17_RS11705	0.40	+0.7
2,601,701	+		HER17_RS11705	0.40	+0.1
2,601,701	+		HER17_RS11705	0.40	+0.6
2,601,701	+		HER17_RS11705	0.40	+0.6
2,601,702	-		HER17_RS11705	0.40	-0.1
2,601,798	+		HER17_RS11705	0.48	-0.4
2,601,798	+		HER17_RS11705	0.48	-0.2
2,601,799	-		HER17_RS11705	0.48	-0.2
2,601,799	-		HER17_RS11705	0.48	-0.3
2,601,823	-		HER17_RS11705	0.50	+0.4