Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS11520

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,559,768	-				-0.5
2,559,768	-				-0.4
2,559,768	-				-0.7
2,559,768	-				+0.2
2,559,770	-				+0.5
2,559,770	-				-0.1
2,559,772	-				+0.3
2,559,790	-				-0.7
2,559,834	-				-0.2
2,559,834	-				+0.2
2,559,834	-				+0.0
2,559,834	-				-0.4
2,559,834	-				-0.5
2,559,840	+				+1.0
2,559,840	+				+0.4
2,559,840	+				+0.2
2,559,841	-				+1.0
2,559,841	-				+1.3
2,559,855	-				+0.2
2,559,855	-				+0.9
2,559,913	+				-0.5
2,559,913	+				+0.4
2,559,914	-				-0.3
2,559,945	-				+0.1
2,559,999	+				-0.6
2,559,999	+				-0.0
2,559,999	+				-0.2
2,560,000	-				-0.8
2,560,000	-				-1.9
2,560,000	-				-0.0
2,560,013	+				-0.1
2,560,014	-				-0.9
2,560,037	+				+0.6
2,560,037	+				-0.4
2,560,037	+				-0.0
2,560,037	+				+0.2
2,560,037	+				-0.4
2,560,038	-				-0.1
2,560,075	+		HER17_RS11525	0.12	-0.0
2,560,076	-		HER17_RS11525	0.12	+0.0
2,560,179	-		HER17_RS11525	0.19	-1.8
2,560,240	+		HER17_RS11525	0.23	+0.8
2,560,241	-		HER17_RS11525	0.23	-0.1
2,560,360	+		HER17_RS11525	0.32	-0.7
2,560,381	+		HER17_RS11525	0.33	+0.4
2,560,446	+		HER17_RS11525	0.38	+2.3
2,560,446	+		HER17_RS11525	0.38	-0.2
2,560,447	-		HER17_RS11525	0.38	-0.1
2,560,448	+		HER17_RS11525	0.38	+0.3
2,560,448	+		HER17_RS11525	0.38	-0.2
2,560,448	+		HER17_RS11525	0.38	-1.1
2,560,448	+		HER17_RS11525	0.38	-0.3
2,560,449	-		HER17_RS11525	0.38	-0.4
2,560,449	-		HER17_RS11525	0.38	-0.4
2,560,449	-		HER17_RS11525	0.38	-0.6
2,560,449	-		HER17_RS11525	0.38	-0.3
2,560,549	+		HER17_RS11525	0.45	+0.3