Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS10775

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,404,137	+		HER17_RS10770	0.11	+1.2
2,404,137	+		HER17_RS10770	0.11	-0.3
2,404,137	+		HER17_RS10770	0.11	+0.6
2,404,137	+		HER17_RS10770	0.11	+0.1
2,404,138	-		HER17_RS10770	0.12	+0.1
2,404,332	+		HER17_RS10770	0.31	-0.8
2,404,332	+		HER17_RS10770	0.31	+0.1
2,404,333	-		HER17_RS10770	0.31	-1.7
2,404,333	-		HER17_RS10770	0.31	+0.9
2,404,341	+		HER17_RS10770	0.32	-1.3
2,404,362	-		HER17_RS10770	0.34	+0.4
2,404,365	+		HER17_RS10770	0.35	+0.1
2,404,365	+		HER17_RS10770	0.35	+0.0
2,404,365	+		HER17_RS10770	0.35	-1.5
2,404,366	-		HER17_RS10770	0.35	-0.4
2,404,424	-		HER17_RS10770	0.41	+0.5
2,404,429	-		HER17_RS10770	0.41	-0.3
2,404,528	+		HER17_RS10770	0.51	-0.4
2,404,615	+		HER17_RS10770	0.60	-0.5
2,404,615	+		HER17_RS10770	0.60	-0.2
2,404,616	-		HER17_RS10770	0.60	+1.1
2,404,616	-		HER17_RS10770	0.60	+0.9
2,404,620	+		HER17_RS10770	0.61	-1.5
2,404,621	-		HER17_RS10770	0.61	-1.4
2,404,713	+		HER17_RS10770	0.70	-0.3
2,404,713	+		HER17_RS10770	0.70	+1.8
2,404,730	+		HER17_RS10770	0.72	-0.2
2,404,923	+				-0.3
2,404,923	+				+0.2
2,404,923	+				+0.4
2,404,923	+				+1.0
2,404,924	-				+0.1
2,404,924	-				+0.8
2,404,946	+				-1.0
2,404,946	+				-0.2
2,404,946	+				+0.1
2,404,947	-				+1.4
2,404,947	-				-0.2
2,404,948	+				-0.2
2,404,949	-				+0.2
2,405,066	+				-0.3
2,405,067	-				+0.4
2,405,067	-				-0.3
2,405,083	-				-1.0
2,405,117	+				-0.1
2,405,118	-				-0.1
2,405,118	-				-0.5
2,405,123	+				+0.4
2,405,123	+				-0.4
2,405,124	-				+0.2
2,405,124	-				+0.3
2,405,124	-				+1.5
2,405,124	-				+0.1
2,405,124	-				-0.7
2,405,174	+				-0.7
2,405,174	+				-0.8
2,405,174	+				-0.0
2,405,175	-				+0.4
2,405,175	-				-0.1
2,405,178	-				-1.1
2,405,203	+				-0.2
2,405,215	-				-0.7
2,405,219	+				+1.1
2,405,219	+				+1.9
2,405,220	-				-0.2
2,405,220	-				-0.9
2,405,220	-				-1.7
2,405,220	-				-1.0
2,405,221	+				+1.1
2,405,221	+				-2.1
2,405,221	+				+0.7
2,405,221	+				-0.0
2,405,222	-				+0.1
2,405,222	-				-0.2
2,405,222	-				+0.8
2,405,222	-				-0.8
2,405,329	+		HER17_RS10775	0.20	+0.4
2,405,430	+		HER17_RS10775	0.30	-0.4
2,405,430	+		HER17_RS10775	0.30	+1.7
2,405,430	+		HER17_RS10775	0.30	+0.6
2,405,430	+		HER17_RS10775	0.30	-0.7
2,405,430	+		HER17_RS10775	0.30	-0.7
2,405,430	+		HER17_RS10775	0.30	+0.3
2,405,430	+		HER17_RS10775	0.30	+1.1
2,405,430	+		HER17_RS10775	0.30	+0.7
2,405,430	+		HER17_RS10775	0.30	+0.8
2,405,430	+		HER17_RS10775	0.30	-0.3
2,405,431	-		HER17_RS10775	0.30	-0.9
2,405,431	-		HER17_RS10775	0.30	-0.9
2,405,431	-		HER17_RS10775	0.30	+0.6
2,405,431	-		HER17_RS10775	0.30	-0.1
2,405,431	-		HER17_RS10775	0.30	+0.6
2,405,431	-		HER17_RS10775	0.30	-0.6
2,405,431	-		HER17_RS10775	0.30	+0.2
2,405,431	-		HER17_RS10775	0.30	-0.4
2,405,431	-		HER17_RS10775	0.30	+0.7
2,405,432	+		HER17_RS10775	0.30	+0.3
2,405,433	-		HER17_RS10775	0.30	-0.4
2,405,433	-		HER17_RS10775	0.30	+0.3
2,405,493	-		HER17_RS10775	0.36	+0.4
2,405,664	-		HER17_RS10775	0.53	+0.2
2,405,867	+		HER17_RS10775	0.73	+0.4
2,405,867	+		HER17_RS10775	0.73	-0.3
2,405,887	+		HER17_RS10775	0.75	+1.7
2,405,928	+		HER17_RS10775	0.79	-0.4
2,405,977	+		HER17_RS10775	0.84	+0.7
2,405,978	-		HER17_RS10775	0.84	-0.3
2,405,994	+		HER17_RS10775	0.86	-0.5
2,405,995	-		HER17_RS10775	0.86	-0.9
2,406,256	-				-0.4
2,406,256	-				+0.1
2,406,281	+		HER17_RS10780	0.13	+0.2
2,406,290	+		HER17_RS10780	0.15	-0.6
2,406,290	+		HER17_RS10780	0.15	-0.4
2,406,290	+		HER17_RS10780	0.15	+0.4
2,406,290	+		HER17_RS10780	0.15	+0.1
2,406,291	-		HER17_RS10780	0.16	-0.1
2,406,296	+		HER17_RS10780	0.17	-0.5
2,406,296	+		HER17_RS10780	0.17	+0.0
2,406,297	-		HER17_RS10780	0.17	-0.0
2,406,297	-		HER17_RS10780	0.17	+0.3
2,406,300	+		HER17_RS10780	0.18	+0.1
2,406,301	-		HER17_RS10780	0.18	-0.0
2,406,302	+		HER17_RS10780	0.18	-0.0
2,406,336	+		HER17_RS10780	0.25	-1.5
2,406,336	+		HER17_RS10780	0.25	-1.2
2,406,345	-		HER17_RS10780	0.27	+0.6
2,406,367	-		HER17_RS10780	0.32	+0.5
2,406,369	+		HER17_RS10780	0.33	-0.1
2,406,369	+		HER17_RS10780	0.33	+0.1
2,406,444	+		HER17_RS10780	0.49	-0.3
2,406,463	-		HER17_RS10780	0.53	+0.3
2,406,510	-		HER17_RS10780	0.64	-0.2
2,406,517	-		HER17_RS10780	0.65	+0.2
2,406,656	-				+0.3
2,406,675	+				+1.0
2,406,675	+				-0.5
2,406,676	-				+0.7
2,406,676	-				+0.4
2,406,676	-				-0.0
2,406,698	+				+0.1
2,406,703	-				+0.8
2,406,708	+				-0.1
2,406,708	+				+0.3
2,406,708	+				+0.5
2,406,708	+				-1.5
2,406,709	-				+0.2
2,406,752	-				+0.5
2,406,757	+				-0.6
2,406,759	+				+0.2
2,406,759	+				+0.2
2,406,849	+				+0.1
2,406,877	-				+0.3
2,407,110	-		HER17_RS10785	0.19	+0.8
2,407,110	-		HER17_RS10785	0.19	+0.7