Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS10700

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,387,118	-		HER17_RS10695	0.44	-0.4
2,387,118	-		HER17_RS10695	0.44	+0.2
2,387,120	+		HER17_RS10695	0.44	-0.2
2,387,204	+		HER17_RS10695	0.51	-0.1
2,387,204	+		HER17_RS10695	0.51	-2.0
2,387,205	-		HER17_RS10695	0.51	-0.6
2,387,282	-		HER17_RS10695	0.57	+0.1
2,387,345	+		HER17_RS10695	0.63	-0.3
2,387,404	+		HER17_RS10695	0.67	+0.2
2,387,404	+		HER17_RS10695	0.67	+0.2
2,387,405	-		HER17_RS10695	0.67	-0.9
2,387,405	-		HER17_RS10695	0.67	+0.3
2,387,405	-		HER17_RS10695	0.67	+0.3
2,387,452	+		HER17_RS10695	0.71	+0.7
2,387,452	+		HER17_RS10695	0.71	+0.8
2,387,452	+		HER17_RS10695	0.71	-1.1
2,387,453	-		HER17_RS10695	0.71	+0.5
2,387,453	-		HER17_RS10695	0.71	-0.1
2,387,453	-		HER17_RS10695	0.71	-0.4
2,387,546	+		HER17_RS10695	0.79	-0.1
2,387,547	-		HER17_RS10695	0.79	+0.3
2,387,547	-		HER17_RS10695	0.79	-1.8
2,387,566	+		HER17_RS10695	0.81	+0.3
2,387,623	+		HER17_RS10695	0.85	+0.1
2,387,624	-		HER17_RS10695	0.85	-0.7
2,387,681	+				+0.3
2,387,682	-				-0.1
2,387,765	+				-1.1
2,387,811	+				-1.0
2,387,822	+				-0.1
2,387,830	-				+0.1
2,387,888	-				+0.3
2,387,888	-				-0.9
2,388,003	+				-0.7
2,388,028	-				-0.4
2,388,064	+				+0.2
2,388,071	+				-0.6
2,388,071	+				+0.2
2,388,071	+				+0.7
2,388,086	+				-0.4
2,388,086	+				-0.9
2,388,087	-				+0.6
2,388,087	-				+0.8
2,388,087	-				-0.4
2,388,090	+				+0.3
2,388,090	+				-0.2
2,388,091	-				-1.7
2,388,091	-				-0.5
2,388,094	+				-0.5
2,388,094	+				-0.3
2,388,095	-				-0.7
2,388,162	+				-0.2
2,388,163	-				+0.2
2,388,213	+				+0.5
2,388,214	-				-1.0
2,388,259	+		HER17_RS10700	0.13	+0.4
2,388,290	-		HER17_RS10700	0.15	-0.1
2,388,290	-		HER17_RS10700	0.15	+1.4
2,388,293	-		HER17_RS10700	0.15	-0.0
2,388,293	-		HER17_RS10700	0.15	-0.1
2,388,317	-		HER17_RS10700	0.17	-2.0
2,388,528	+		HER17_RS10700	0.35	+0.3
2,388,528	+		HER17_RS10700	0.35	-0.3
2,388,529	-		HER17_RS10700	0.35	+0.6
2,388,529	-		HER17_RS10700	0.35	-0.1
2,388,534	-		HER17_RS10700	0.36	-0.6
2,388,572	-		HER17_RS10700	0.39	-0.0
2,388,645	-		HER17_RS10700	0.45	-0.8
2,388,665	+		HER17_RS10700	0.47	-0.6
2,388,714	+		HER17_RS10700	0.51	+0.3
2,388,714	+		HER17_RS10700	0.51	-0.1
2,388,714	+		HER17_RS10700	0.51	-1.1
2,388,773	+		HER17_RS10700	0.56	-0.4
2,388,809	-		HER17_RS10700	0.59	-0.1
2,388,845	-		HER17_RS10700	0.62	-0.1
2,388,870	+		HER17_RS10700	0.64	-0.7
2,388,870	+		HER17_RS10700	0.64	+0.1
2,388,941	+		HER17_RS10700	0.70	+0.4
2,388,968	-		HER17_RS10700	0.72	-0.5
2,388,988	-		HER17_RS10700	0.74	+0.4
2,388,994	+		HER17_RS10700	0.75	-0.3
2,388,994	+		HER17_RS10700	0.75	-0.8
2,388,995	-		HER17_RS10700	0.75	+0.1
2,388,995	-		HER17_RS10700	0.75	+0.5
2,389,019	+		HER17_RS10700	0.77	-0.0
2,389,020	-		HER17_RS10700	0.77	+0.3
2,389,020	-		HER17_RS10700	0.77	+0.0
2,389,089	-		HER17_RS10700	0.83	+0.2
2,389,146	-		HER17_RS10700	0.87	+0.2
2,389,156	+		HER17_RS10700	0.88	-0.3
2,389,259	-				+0.9
2,389,323	+				+0.0
2,389,390	+				-0.9
2,389,443	-				+0.2
2,389,446	+				+0.6
2,389,447	-				-0.0
2,389,562	-				+0.7
2,389,775	-		HER17_RS10705	0.37	-1.6
2,389,801	+		HER17_RS10705	0.40	-2.5
2,389,802	-		HER17_RS10705	0.40	+0.7
2,389,858	+		HER17_RS10705	0.48	+0.5
2,389,858	+		HER17_RS10705	0.48	+0.2
2,389,859	-		HER17_RS10705	0.48	-0.4
2,389,900	+		HER17_RS10705	0.53	-0.2
2,389,937	+		HER17_RS10705	0.58	+0.6
2,389,959	+		HER17_RS10705	0.61	+0.1
2,389,960	-		HER17_RS10705	0.61	-0.1
2,389,969	+		HER17_RS10705	0.63	-0.1
2,389,981	-		HER17_RS10705	0.64	-1.5
2,390,100	-		HER17_RS10705	0.80	+0.0
2,390,227	-				-1.4
2,390,260	+				-0.2
2,390,260	+				+0.1
2,390,261	-				+0.4
2,390,270	-				+0.7