Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS09790

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,165,479	-		HER17_RS09780	0.85	-1.0
2,165,479	-		HER17_RS09780	0.85	+0.0
2,165,479	-		HER17_RS09780	0.85	+0.0
2,165,503	-		HER17_RS09780	0.86	-0.2
2,165,503	-		HER17_RS09780	0.86	+0.1
2,165,642	+				+0.9
2,165,642	+				+0.1
2,165,642	+				-0.7
2,165,642	+				+0.2
2,165,715	+				+0.5
2,165,715	+				+0.6
2,165,746	+				+0.3
2,165,894	-		HER17_RS09785	0.26	+0.4
2,165,894	-		HER17_RS09785	0.26	+0.4
2,165,894	-		HER17_RS09785	0.26	+0.3
2,165,993	+		HER17_RS09785	0.39	-0.4
2,165,993	+		HER17_RS09785	0.39	+0.2
2,166,058	+		HER17_RS09785	0.48	-0.2
2,166,067	+		HER17_RS09785	0.50	-0.5
2,166,169	+		HER17_RS09785	0.64	+0.4
2,166,169	+		HER17_RS09785	0.64	-0.8
2,166,169	+		HER17_RS09785	0.64	-0.2
2,166,169	+		HER17_RS09785	0.64	-0.5
2,166,170	-		HER17_RS09785	0.64	-0.6
2,166,388	+				-0.1
2,166,448	-				-0.8
2,166,453	-				-1.6
2,166,474	+				-0.4
2,166,474	+				+0.3
2,166,474	+				+0.1
2,166,474	+				-1.6
2,166,475	-				+0.3
2,166,475	-				+0.0
2,166,475	-				+0.3
2,166,475	-				+0.1
2,166,475	-				+0.1
2,166,475	-				-0.6
2,166,475	-				-0.3
2,166,528	+		HER17_RS09790	0.14	-1.0
2,166,647	+		HER17_RS09790	0.32	-0.0
2,166,670	-		HER17_RS09790	0.35	-0.7
2,166,670	-		HER17_RS09790	0.35	+0.3
2,166,670	-		HER17_RS09790	0.35	+0.8
2,166,694	+		HER17_RS09790	0.38	+0.2
2,166,694	+		HER17_RS09790	0.38	+0.8
2,166,695	-		HER17_RS09790	0.39	+0.0
2,166,890	+		HER17_RS09790	0.67	-0.1
2,166,890	+		HER17_RS09790	0.67	-0.7
2,166,891	-		HER17_RS09790	0.67	+0.7
2,167,116	+				-0.2
2,167,117	-				-0.1
2,167,120	+				-0.2
2,167,120	+				+0.2
2,167,120	+				+0.3
2,167,121	-				-0.5
2,167,132	+				-0.0
2,167,132	+				+0.0
2,167,133	-				-0.9
2,167,150	+				+0.4
2,167,150	+				+1.1
2,167,151	-				-0.5
2,167,173	-				+0.1
2,167,240	+				+1.1
2,167,240	+				-1.5
2,167,240	+				-0.0
2,167,278	+				+0.1
2,167,278	+				-0.4
2,167,310	-				+0.8
2,167,328	+				+0.4
2,167,328	+				-0.9
2,167,329	-				+0.2
2,167,435	+				+0.6
2,167,435	+				+0.5
2,167,436	-				-0.1
2,167,436	-				+0.4
2,167,511	-		HER17_RS09795	0.14	-0.7
2,167,583	+		HER17_RS09795	0.22	+0.2
2,167,613	+		HER17_RS09795	0.26	+0.4
2,167,613	+		HER17_RS09795	0.26	+0.2
2,167,614	-		HER17_RS09795	0.26	+0.1
2,167,614	-		HER17_RS09795	0.26	-0.0
2,167,614	-		HER17_RS09795	0.26	+1.3
2,167,614	-		HER17_RS09795	0.26	+0.7
2,167,614	-		HER17_RS09795	0.26	+0.4
2,167,614	-		HER17_RS09795	0.26	+0.1
2,167,617	+		HER17_RS09795	0.26	+0.3
2,167,617	+		HER17_RS09795	0.26	+0.8
2,167,618	-		HER17_RS09795	0.26	-0.4
2,167,618	-		HER17_RS09795	0.26	+1.1
2,167,618	-		HER17_RS09795	0.26	-0.7
2,167,618	-		HER17_RS09795	0.26	+0.1
2,167,619	+		HER17_RS09795	0.27	+0.2
2,167,619	+		HER17_RS09795	0.27	+0.3
2,167,619	+		HER17_RS09795	0.27	-0.2
2,167,620	-		HER17_RS09795	0.27	+0.9
2,167,620	-		HER17_RS09795	0.27	+0.3
2,167,620	-		HER17_RS09795	0.27	+0.5
2,167,620	-		HER17_RS09795	0.27	+1.1
2,167,620	-		HER17_RS09795	0.27	+0.7
2,167,780	-		HER17_RS09795	0.45	-0.7
2,167,851	+		HER17_RS09795	0.53	+1.1
2,167,852	-		HER17_RS09795	0.53	+0.3