Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS09390

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,059,882	+				+0.2
2,059,892	+				+0.4
2,059,893	-				-0.7
2,059,896	-				-0.3
2,059,977	+				-0.3
2,059,977	+				-0.6
2,059,978	-				+0.6
2,059,978	-				-0.4
2,060,060	-				+1.0
2,060,089	-				+0.3
2,060,171	+		HER17_RS09390	0.20	-0.1
2,060,171	+		HER17_RS09390	0.20	-0.5
2,060,172	-		HER17_RS09390	0.20	-1.8
2,060,172	-		HER17_RS09390	0.20	+0.2
2,060,249	+		HER17_RS09390	0.31	+0.1
2,060,250	-		HER17_RS09390	0.31	+0.4
2,060,450	+		HER17_RS09390	0.58	+0.3
2,060,451	-		HER17_RS09390	0.58	-0.4
2,060,491	+		HER17_RS09390	0.63	-0.3
2,060,499	-		HER17_RS09390	0.64	-1.4
2,060,573	+		HER17_RS09390	0.74	-2.6
2,060,573	+		HER17_RS09390	0.74	+1.0
2,060,665	+		HER17_RS09390	0.86	-0.5
2,060,666	-		HER17_RS09390	0.87	-0.7
2,060,670	+		HER17_RS09390	0.87	-1.3
2,060,670	+		HER17_RS09390	0.87	+0.5
2,060,670	+		HER17_RS09390	0.87	-0.2
2,060,671	-		HER17_RS09390	0.87	+0.5
2,060,671	-		HER17_RS09390	0.87	-0.4
2,060,671	-		HER17_RS09390	0.87	-0.8
2,060,818	+		HER17_RS09395	0.17	-1.6
2,060,841	+		HER17_RS09395	0.24	+1.1
2,060,841	+		HER17_RS09395	0.24	-0.4
2,060,841	+		HER17_RS09395	0.24	-0.1
2,060,842	-		HER17_RS09395	0.24	-0.3
2,060,842	-		HER17_RS09395	0.24	-0.1
2,060,873	-		HER17_RS09395	0.33	+0.2
2,061,045	+		HER17_RS09395	0.84	+0.9
2,061,102	+				-1.1
2,061,102	+				+0.2
2,061,103	-				-0.3
2,061,103	-				-0.0
2,061,104	+				-0.2
2,061,104	+				+1.5
2,061,104	+				-0.9
2,061,105	-				+0.4
2,061,105	-				-0.3
2,061,105	-				-0.3
2,061,105	-				-0.4
2,061,150	+				-0.3
2,061,154	+				+1.0
2,061,155	-				+0.8
2,061,207	-		HER17_RS09400	0.27	+0.6
2,061,229	+		HER17_RS09400	0.37	+0.3
2,061,229	+		HER17_RS09400	0.37	+1.2
2,061,239	+		HER17_RS09400	0.42	-1.3
2,061,239	+		HER17_RS09400	0.42	-0.0
2,061,239	+		HER17_RS09400	0.42	-0.7
2,061,239	+		HER17_RS09400	0.42	-0.4
2,061,240	-		HER17_RS09400	0.42	+0.1
2,061,271	+		HER17_RS09400	0.56	-0.5
2,061,271	+		HER17_RS09400	0.56	+0.2
2,061,356	+				-0.7
2,061,477	-				-0.1
2,061,479	-				+0.2
2,061,697	+				-0.1
2,061,698	-				-0.1
2,061,698	-				+0.2
2,061,698	-				-0.0
2,061,703	-				-0.4
2,061,703	-				-0.6
2,061,703	-				-0.4