Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS09195

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,016,684	-		HER17_RS09185	0.88	-2.0
2,017,186	+		HER17_RS09190	0.52	-0.5
2,017,186	+		HER17_RS09190	0.52	-0.1
2,017,457	-		HER17_RS09190	0.86	+0.2
2,017,467	+		HER17_RS09190	0.87	-0.2
2,017,467	+		HER17_RS09190	0.87	+0.0
2,017,468	-		HER17_RS09190	0.87	+0.3
2,017,468	-		HER17_RS09190	0.87	+1.2
2,017,468	-		HER17_RS09190	0.87	-0.7
2,017,470	+		HER17_RS09190	0.87	-0.8
2,017,470	+		HER17_RS09190	0.87	-0.2
2,017,471	-		HER17_RS09190	0.88	-0.7
2,017,471	-		HER17_RS09190	0.88	+0.2
2,017,471	-		HER17_RS09190	0.88	-0.7
2,017,471	-		HER17_RS09190	0.88	+0.5
2,017,474	+		HER17_RS09190	0.88	+0.4
2,017,474	+		HER17_RS09190	0.88	-0.1
2,017,474	+		HER17_RS09190	0.88	+0.3
2,017,474	+		HER17_RS09190	0.88	+0.7
2,017,489	-		HER17_RS09190	0.90	-0.5
2,017,489	-		HER17_RS09190	0.90	-0.5
2,017,529	+				+0.0
2,017,563	+				-0.5
2,017,593	+				-0.2
2,017,663	+		HER17_RS09195	0.11	+0.1
2,017,663	+		HER17_RS09195	0.11	+0.1
2,017,663	+		HER17_RS09195	0.11	+1.0
2,017,663	+		HER17_RS09195	0.11	-0.0
2,017,663	+		HER17_RS09195	0.11	+0.0
2,017,664	-		HER17_RS09195	0.11	-0.2
2,017,664	-		HER17_RS09195	0.11	+0.1
2,017,664	-		HER17_RS09195	0.11	-0.5
2,017,664	-		HER17_RS09195	0.11	+0.8
2,017,745	-		HER17_RS09195	0.22	-1.8
2,017,832	+		HER17_RS09195	0.33	-0.5
2,017,832	+		HER17_RS09195	0.33	+0.9
2,017,935	-		HER17_RS09195	0.47	-1.0
2,018,101	+		HER17_RS09195	0.69	+0.2
2,018,101	+		HER17_RS09195	0.69	-0.0
2,018,104	+		HER17_RS09195	0.70	-0.2
2,018,105	-		HER17_RS09195	0.70	+0.2
2,018,126	+		HER17_RS09195	0.73	+0.4
2,018,204	+		HER17_RS09195	0.83	+0.1
2,018,205	-		HER17_RS09195	0.83	+0.2
2,018,327	+				+0.7
2,018,361	+				+1.5
2,018,361	+				+0.1
2,018,361	+				+0.7
2,018,362	-				+1.6
2,018,413	+		HER17_RS09200	0.11	-0.7
2,018,414	-		HER17_RS09200	0.11	+0.5
2,018,482	-		HER17_RS09200	0.22	-0.7
2,018,533	-		HER17_RS09200	0.30	-0.6
2,018,533	-		HER17_RS09200	0.30	-0.7
2,018,533	-		HER17_RS09200	0.30	+0.6
2,018,550	+		HER17_RS09200	0.33	-0.1
2,018,551	-		HER17_RS09200	0.33	+0.0
2,018,551	-		HER17_RS09200	0.33	+0.7
2,018,581	+		HER17_RS09200	0.38	-0.4
2,018,581	+		HER17_RS09200	0.38	-1.3
2,018,582	-		HER17_RS09200	0.38	+0.9
2,018,582	-		HER17_RS09200	0.38	+0.2
2,018,582	-		HER17_RS09200	0.38	-0.4
2,018,582	-		HER17_RS09200	0.38	+0.4
2,018,702	-		HER17_RS09200	0.57	-0.3
2,018,709	+		HER17_RS09200	0.58	+0.0
2,018,709	+		HER17_RS09200	0.58	+0.1
2,018,710	-		HER17_RS09200	0.58	+0.0
2,018,710	-		HER17_RS09200	0.58	+0.5
2,018,710	-		HER17_RS09200	0.58	+1.8
2,018,860	+		HER17_RS09200	0.82	-1.7
2,018,860	+		HER17_RS09200	0.82	+0.7
2,018,861	-		HER17_RS09200	0.82	+0.2
2,019,123	-				+0.0
2,019,140	+				+1.9
2,019,213	+				-0.2
2,019,213	+				-0.3
2,019,213	+				-0.6
2,019,214	-				-0.5
2,019,219	-				+0.6
2,019,219	-				-0.3