Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS08685

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,906,266	+				-0.2
1,906,270	+				-1.4
1,906,270	+				-0.3
1,906,270	+				-0.4
1,906,271	-				-0.3
1,906,280	+				-1.3
1,906,284	+				-0.3
1,906,285	-				+0.9
1,906,344	+				+0.1
1,906,345	-				+0.9
1,906,345	-				-0.0
1,906,495	-		HER17_RS08685	0.26	+0.8
1,906,510	+		HER17_RS08685	0.28	-0.4
1,906,588	+		HER17_RS08685	0.38	+0.3
1,906,589	-		HER17_RS08685	0.38	-0.3
1,906,642	-		HER17_RS08685	0.44	-0.8
1,906,677	+		HER17_RS08685	0.49	+1.5
1,906,678	-		HER17_RS08685	0.49	-0.9
1,906,698	+		HER17_RS08685	0.51	+0.2
1,906,698	+		HER17_RS08685	0.51	+0.8
1,906,698	+		HER17_RS08685	0.51	-0.3
1,906,804	+		HER17_RS08685	0.65	-0.7
1,906,804	+		HER17_RS08685	0.65	+1.1
1,906,804	+		HER17_RS08685	0.65	-0.2
1,906,804	+		HER17_RS08685	0.65	+0.3
1,906,804	+		HER17_RS08685	0.65	-0.1
1,906,804	+		HER17_RS08685	0.65	-0.3
1,906,804	+		HER17_RS08685	0.65	+0.9
1,906,805	-		HER17_RS08685	0.65	+0.3
1,906,805	-		HER17_RS08685	0.65	-2.6
1,906,805	-		HER17_RS08685	0.65	+0.2
1,906,805	-		HER17_RS08685	0.65	-0.3
1,906,805	-		HER17_RS08685	0.65	-0.9
1,906,806	+		HER17_RS08685	0.65	+0.9
1,906,807	-		HER17_RS08685	0.65	-0.5
1,906,954	+		HER17_RS08685	0.83	-0.4
1,906,955	-		HER17_RS08685	0.84	+0.9
1,906,955	-		HER17_RS08685	0.84	+0.1
1,906,955	-		HER17_RS08685	0.84	+0.5
1,906,955	-		HER17_RS08685	0.84	+0.4
1,906,959	-		HER17_RS08685	0.84	+0.4
1,906,976	-		HER17_RS08685	0.86	-1.0
1,906,976	-		HER17_RS08685	0.86	-0.6
1,906,976	-		HER17_RS08685	0.86	+0.2
1,907,084	-				-0.5
1,907,120	-				+0.2
1,907,348	+				-1.7
1,907,348	+				+0.7
1,907,349	-				+0.7
1,907,349	-				-0.1
1,907,349	-				-0.8
1,907,349	-				+1.6
1,907,349	-				-0.3
1,907,350	+				-0.4
1,907,350	+				-0.5
1,907,350	+				-0.4
1,907,351	-				-0.5
1,907,351	-				-0.4
1,907,357	+				+0.1
1,907,366	+				-0.1
1,907,376	-				+1.2
1,907,379	-				-1.0
1,907,398	+				+0.0
1,907,398	+				-0.3
1,907,399	-				+0.1
1,907,399	-				-0.1
1,907,434	-				+0.9
1,907,437	+				-0.2
1,907,437	+				-0.0
1,907,437	+				+0.6
1,907,438	-				+1.5
1,907,438	-				+0.2
1,907,438	-				+0.4
1,907,510	-				-0.6
1,907,614	+		HER17_RS08690	0.15	-0.4
1,907,614	+		HER17_RS08690	0.15	-0.1
1,907,617	+		HER17_RS08690	0.15	+0.6
1,907,654	+		HER17_RS08690	0.18	-0.3
1,907,655	-		HER17_RS08690	0.18	-0.1
1,907,675	-		HER17_RS08690	0.19	+0.4
1,907,701	+		HER17_RS08690	0.21	+0.4
1,907,702	-		HER17_RS08690	0.21	+0.6
1,907,706	+		HER17_RS08690	0.21	+1.0
1,907,786	+		HER17_RS08690	0.27	-0.5
1,907,787	-		HER17_RS08690	0.27	+0.4
1,907,787	-		HER17_RS08690	0.27	-0.3
1,907,788	+		HER17_RS08690	0.27	+0.9
1,907,788	+		HER17_RS08690	0.27	+0.1
1,907,788	+		HER17_RS08690	0.27	-0.2
1,907,789	-		HER17_RS08690	0.27	+0.0
1,907,789	-		HER17_RS08690	0.27	-0.1
1,907,789	-		HER17_RS08690	0.27	+0.3
1,907,789	-		HER17_RS08690	0.27	+0.4
1,907,789	-		HER17_RS08690	0.27	+1.0
1,907,804	+		HER17_RS08690	0.28	-0.1
1,907,926	+		HER17_RS08690	0.37	+0.5
1,907,940	+		HER17_RS08690	0.38	+0.3
1,907,990	+		HER17_RS08690	0.41	+0.0
1,907,991	-		HER17_RS08690	0.41	-0.3
1,907,991	-		HER17_RS08690	0.41	-2.0
1,907,991	-		HER17_RS08690	0.41	+0.5
1,908,045	+		HER17_RS08690	0.45	-0.6
1,908,045	+		HER17_RS08690	0.45	-0.0