Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HER17_RS04385 and HER17_RS04390 are separated by 382 nucleotides HER17_RS04390 and HER17_RS04395 are separated by 142 nucleotides HER17_RS04395 and HER17_RS04400 are separated by 239 nucleotides
HER17_RS04385: HER17_RS04385 - D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase, at 998,426 to 998,989
_RS04385
HER17_RS04390: HER17_RS04390 - 16S ribosomal RNA, at 999,372 to 1,000,917
_RS04390
HER17_RS04395: HER17_RS04395 - tRNA-Glu, at 1,001,060 to 1,001,132
_RS04395
HER17_RS04400: HER17_RS04400 - 23S ribosomal RNA, at 1,001,372 to 1,004,285
_RS04400
Position (kb) 999
1000
1001 Strain fitness (log2 ratio) -2
-1
0
1 at 998.392 kb on + strand at 998.404 kb on + strand at 998.489 kb on + strand, within HER17_RS04385 at 998.490 kb on - strand, within HER17_RS04385 at 998.490 kb on - strand, within HER17_RS04385 at 998.518 kb on + strand, within HER17_RS04385 at 998.629 kb on + strand, within HER17_RS04385 at 998.629 kb on + strand, within HER17_RS04385 at 998.693 kb on + strand, within HER17_RS04385 at 998.806 kb on + strand, within HER17_RS04385 at 998.806 kb on + strand, within HER17_RS04385 at 998.806 kb on + strand, within HER17_RS04385 at 998.806 kb on + strand, within HER17_RS04385 at 998.819 kb on + strand, within HER17_RS04385 at 998.819 kb on + strand, within HER17_RS04385 at 998.819 kb on + strand, within HER17_RS04385 at 998.819 kb on + strand, within HER17_RS04385 at 998.822 kb on - strand, within HER17_RS04385 at 998.871 kb on + strand, within HER17_RS04385 at 998.893 kb on + strand, within HER17_RS04385 at 998.987 kb on + strand at 999.065 kb on - strand at 999.067 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 998,392 + -0.1 998,404 + +1.1 998,489 + HER17_RS04385 0.11 -0.4 998,490 - HER17_RS04385 0.11 +1.4 998,490 - HER17_RS04385 0.11 -0.7 998,518 + HER17_RS04385 0.16 -0.1 998,629 + HER17_RS04385 0.36 -1.7 998,629 + HER17_RS04385 0.36 +0.3 998,693 + HER17_RS04385 0.47 +0.3 998,806 + HER17_RS04385 0.67 -1.4 998,806 + HER17_RS04385 0.67 -1.2 998,806 + HER17_RS04385 0.67 -0.9 998,806 + HER17_RS04385 0.67 -0.4 998,819 + HER17_RS04385 0.70 +0.3 998,819 + HER17_RS04385 0.70 -1.0 998,819 + HER17_RS04385 0.70 -1.5 998,819 + HER17_RS04385 0.70 -1.3 998,822 - HER17_RS04385 0.70 -2.0 998,871 + HER17_RS04385 0.79 -1.1 998,893 + HER17_RS04385 0.83 -0.2 998,987 + +1.0 999,065 - +0.0 999,067 - +0.7
Or see this region's nucleotide sequence