Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS20720

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,645,062	+				-0.3
4,645,062	+				+0.6
4,645,068	+				+0.1
4,645,068	+				-0.2
4,645,068	+				+0.0
4,645,110	-		HER17_RS20715	0.17	+1.0
4,645,114	+		HER17_RS20715	0.18	+0.1
4,645,115	-		HER17_RS20715	0.19	-0.3
4,645,147	+		HER17_RS20715	0.32	+0.4
4,645,148	-		HER17_RS20715	0.33	-0.0
4,645,148	-		HER17_RS20715	0.33	+0.5
4,645,158	-		HER17_RS20715	0.37	-0.1
4,645,158	-		HER17_RS20715	0.37	-1.7
4,645,158	-		HER17_RS20715	0.37	+0.3
4,645,158	-		HER17_RS20715	0.37	-0.3
4,645,171	+		HER17_RS20715	0.43	+0.2
4,645,172	-		HER17_RS20715	0.43	-0.1
4,645,265	+		HER17_RS20715	0.83	+0.5
4,645,289	+				+0.1
4,645,319	+				-0.0
4,645,395	-		HER17_RS20720	0.15	-0.2
4,645,405	+		HER17_RS20720	0.17	-0.1
4,645,486	-		HER17_RS20720	0.34	+0.1
4,645,499	+		HER17_RS20720	0.37	-1.6
4,645,626	+		HER17_RS20720	0.64	+0.7
4,645,627	-		HER17_RS20720	0.64	+0.4
4,645,702	+		HER17_RS20720	0.79	+0.7
4,645,788	+				-0.2
4,645,813	+				+0.2
4,645,840	+				-0.5
4,646,100	+				-0.3
4,646,100	+				-0.7
4,646,117	-				+0.3
4,646,121	-				-0.2
4,646,191	+				-0.5
4,646,243	+				+0.4
4,646,243	+				+0.2
4,646,288	+				+0.2
4,646,289	-				+0.2
4,646,289	-				-0.5
4,646,289	-				-0.7
4,646,289	-				+0.9
4,646,303	+				-1.3
4,646,356	+		HER17_RS20725	0.17	+0.1
4,646,357	-		HER17_RS20725	0.18	+1.4
4,646,372	+		HER17_RS20725	0.20	-0.2
4,646,373	-		HER17_RS20725	0.20	-0.6
4,646,373	-		HER17_RS20725	0.20	+0.1
4,646,382	+		HER17_RS20725	0.21	-1.0
4,646,468	+		HER17_RS20725	0.35	-0.3
4,646,469	-		HER17_RS20725	0.35	+0.6
4,646,493	+		HER17_RS20725	0.38	+0.0
4,646,494	-		HER17_RS20725	0.39	+0.3
4,646,495	+		HER17_RS20725	0.39	+0.3
4,646,496	-		HER17_RS20725	0.39	-0.1
4,646,496	-		HER17_RS20725	0.39	+0.7
4,646,517	+		HER17_RS20725	0.42	+0.8
4,646,518	-		HER17_RS20725	0.42	-0.2
4,646,518	-		HER17_RS20725	0.42	-1.0
4,646,520	-		HER17_RS20725	0.43	+0.4
4,646,565	-		HER17_RS20725	0.49	-1.1
4,646,589	+		HER17_RS20725	0.53	-0.4
4,646,589	+		HER17_RS20725	0.53	+0.3
4,646,590	-		HER17_RS20725	0.53	+0.4
4,646,610	+		HER17_RS20725	0.56	-0.2
4,646,615	+		HER17_RS20725	0.57	+0.4
4,646,616	-		HER17_RS20725	0.57	-0.9
4,646,649	+		HER17_RS20725	0.62	-0.6
4,646,651	+		HER17_RS20725	0.63	+0.2
4,646,651	+		HER17_RS20725	0.63	+0.6
4,646,651	+		HER17_RS20725	0.63	-0.2
4,646,651	+		HER17_RS20725	0.63	+0.8
4,646,652	-		HER17_RS20725	0.63	-0.5
4,646,655	+		HER17_RS20725	0.63	+0.1
4,646,685	+		HER17_RS20725	0.68	+0.1
4,646,694	+		HER17_RS20725	0.69	-1.8
4,646,694	+		HER17_RS20725	0.69	+0.9
4,646,694	+		HER17_RS20725	0.69	-0.2
4,646,793	+		HER17_RS20725	0.84	-0.8
4,646,794	-		HER17_RS20725	0.84	+0.5