Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS20170

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,525,578	-				-2.8
4,525,657	-				+0.2
4,526,879	+				+0.4
4,526,952	+				+0.2
4,526,952	+				+0.1
4,526,952	+				+0.2
4,526,952	+				+0.0
4,526,953	-				+1.3
4,526,953	-				+0.6
4,526,953	-				-1.5
4,526,953	-				+0.2
4,526,992	+				-1.7
4,526,993	-				+1.7
4,527,026	+				-1.6
4,527,026	+				+0.4
4,527,026	+				-0.2
4,527,026	+				+0.4
4,527,026	+				-1.3
4,527,026	+				-0.3
4,527,026	+				+0.2
4,527,027	-				+0.1
4,527,027	-				+0.1
4,527,027	-				-0.4
4,527,063	+				+0.4
4,527,063	+				+0.2
4,527,063	+				-0.2
4,527,063	+				+0.0
4,527,063	+				+0.2
4,527,064	-				-0.3
4,527,064	-				+0.7
4,527,064	-				-0.4
4,527,064	-				+0.5
4,527,064	-				+0.5
4,527,086	+				+1.2
4,527,087	-				+0.5
4,527,087	-				+0.3
4,527,087	-				+0.1
4,527,088	+				-0.6
4,527,091	+				-0.2
4,527,091	+				+0.2
4,527,092	-				-0.5
4,527,092	-				+0.4
4,527,132	+				-0.4
4,527,133	-				+3.4
4,527,172	+				-0.4
4,527,172	+				+0.5
4,527,173	-				-0.7
4,527,173	-				-0.2
4,527,173	-				-0.8
4,527,231	+				-0.6
4,527,273	+				+0.3
4,527,361	+		HER17_RS20175	0.14	+0.2
4,527,361	+		HER17_RS20175	0.14	+0.3
4,527,361	+		HER17_RS20175	0.14	+0.8
4,527,361	+		HER17_RS20175	0.14	+0.0
4,527,361	+		HER17_RS20175	0.14	-0.4
4,527,362	-		HER17_RS20175	0.14	+0.2
4,527,362	-		HER17_RS20175	0.14	+0.6
4,527,362	-		HER17_RS20175	0.14	-1.0
4,527,414	+		HER17_RS20175	0.17	-0.6
4,527,456	-		HER17_RS20175	0.19	-0.2
4,527,456	-		HER17_RS20175	0.19	+0.3
4,527,457	+		HER17_RS20175	0.19	+0.1
4,527,457	+		HER17_RS20175	0.19	+0.8
4,527,457	+		HER17_RS20175	0.19	-0.3
4,527,457	+		HER17_RS20175	0.19	+0.6
4,527,457	+		HER17_RS20175	0.19	+0.3
4,527,457	+		HER17_RS20175	0.19	+0.6
4,527,457	+		HER17_RS20175	0.19	+0.4
4,527,457	+		HER17_RS20175	0.19	-1.7
4,527,458	-		HER17_RS20175	0.19	-1.0
4,527,458	-		HER17_RS20175	0.19	-0.6
4,527,458	-		HER17_RS20175	0.19	+0.1
4,527,525	+		HER17_RS20175	0.22	+0.5
4,527,652	+		HER17_RS20175	0.29	-0.1
4,527,652	+		HER17_RS20175	0.29	+0.5
4,527,653	-		HER17_RS20175	0.29	-0.5
4,527,653	-		HER17_RS20175	0.29	-1.1
4,527,653	-		HER17_RS20175	0.29	+0.4
4,527,689	+		HER17_RS20175	0.31	+0.0
4,527,690	-		HER17_RS20175	0.31	+0.3
4,527,690	-		HER17_RS20175	0.31	-1.4
4,527,691	+		HER17_RS20175	0.31	-0.8
4,527,691	+		HER17_RS20175	0.31	+0.7
4,527,691	+		HER17_RS20175	0.31	-0.4
4,527,691	+		HER17_RS20175	0.31	+0.2
4,527,692	-		HER17_RS20175	0.31	-0.6
4,527,692	-		HER17_RS20175	0.31	-0.6
4,527,692	-		HER17_RS20175	0.31	+0.7
4,527,692	-		HER17_RS20175	0.31	+0.4
4,527,692	-		HER17_RS20175	0.31	+0.5
4,527,724	+		HER17_RS20175	0.33	-0.2
4,527,728	+		HER17_RS20175	0.33	-0.1
4,527,753	+		HER17_RS20175	0.34	+1.8
4,527,753	+		HER17_RS20175	0.34	-0.2
4,527,753	+		HER17_RS20175	0.34	-0.4
4,527,753	+		HER17_RS20175	0.34	+0.8
4,527,754	-		HER17_RS20175	0.34	+0.3
4,527,754	-		HER17_RS20175	0.34	+1.0