Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS19530

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,388,159	+		HER17_RS19525	0.64	-0.1
4,388,159	+		HER17_RS19525	0.64	-0.2
4,388,159	+		HER17_RS19525	0.64	+0.2
4,388,159	+		HER17_RS19525	0.64	+0.3
4,388,159	+		HER17_RS19525	0.64	+1.0
4,388,159	+		HER17_RS19525	0.64	-0.6
4,388,160	-		HER17_RS19525	0.64	-0.2
4,388,160	-		HER17_RS19525	0.64	+0.7
4,388,161	+		HER17_RS19525	0.64	+0.2
4,388,249	+		HER17_RS19525	0.69	+1.2
4,388,250	-		HER17_RS19525	0.69	-0.1
4,388,405	+		HER17_RS19525	0.76	-0.5
4,388,406	-		HER17_RS19525	0.76	+0.6
4,388,496	-		HER17_RS19525	0.80	-0.2
4,388,496	-		HER17_RS19525	0.80	-0.3
4,388,496	-		HER17_RS19525	0.80	-0.6
4,388,498	+		HER17_RS19525	0.80	-0.1
4,388,499	-		HER17_RS19525	0.80	+1.0
4,388,660	+		HER17_RS19525	0.88	-0.8
4,388,660	+		HER17_RS19525	0.88	+0.3
4,388,666	+		HER17_RS19525	0.88	-0.1
4,388,667	-		HER17_RS19525	0.88	-0.3
4,388,667	-		HER17_RS19525	0.88	+0.6
4,388,681	+		HER17_RS19525	0.89	+0.1
4,388,681	+		HER17_RS19525	0.89	-0.1
4,388,682	-		HER17_RS19525	0.89	-0.3
4,388,715	-				-0.3
4,388,715	-				+0.2
4,388,898	+				+0.3
4,388,899	-				+1.0
4,388,899	-				-0.5
4,388,983	+				+0.6
4,388,983	+				-0.2
4,389,000	+				-0.1
4,389,000	+				-0.2
4,389,001	-				+0.6
4,389,007	+				+0.2
4,389,007	+				-0.4
4,389,008	-				-0.0
4,389,017	-				-0.0
4,389,017	-				+0.2
4,389,017	-				-0.6
4,389,100	+		HER17_RS19530	0.21	-0.6
4,389,100	+		HER17_RS19530	0.21	+1.2
4,389,101	-		HER17_RS19530	0.22	-1.2
4,389,101	-		HER17_RS19530	0.22	+0.1
4,389,141	+		HER17_RS19530	0.30	-0.2
4,389,141	+		HER17_RS19530	0.30	+0.7
4,389,301	-		HER17_RS19530	0.65	-0.3
4,389,301	-		HER17_RS19530	0.65	+0.1
4,389,301	-		HER17_RS19530	0.65	-0.6
4,389,319	+		HER17_RS19530	0.68	+0.3
4,389,319	+		HER17_RS19530	0.68	+0.7
4,389,377	+		HER17_RS19530	0.81	-0.5
4,389,510	+				-0.3
4,389,511	-				-0.9
4,389,511	-				-0.1
4,389,511	-				+0.9
4,389,511	-				-0.2
4,389,766	+		HER17_RS19535	0.44	-0.8
4,389,869	-		HER17_RS19535	0.60	+0.4
4,389,869	-		HER17_RS19535	0.60	-0.1
4,389,893	+		HER17_RS19535	0.64	-0.2
4,389,894	-		HER17_RS19535	0.64	+0.3
4,390,026	-		HER17_RS19535	0.84	-0.3
4,390,039	+		HER17_RS19535	0.86	-0.8
4,390,039	+		HER17_RS19535	0.86	+0.7
4,390,039	+		HER17_RS19535	0.86	-1.7
4,390,039	+		HER17_RS19535	0.86	-0.3
4,390,040	-		HER17_RS19535	0.86	-0.5
4,390,040	-		HER17_RS19535	0.86	-1.0
4,390,040	-		HER17_RS19535	0.86	-0.8
4,390,040	-		HER17_RS19535	0.86	-0.3
4,390,077	+				-0.8
4,390,078	-				-0.1
4,390,095	+				-0.8
4,390,110	+				-0.2
4,390,110	+				-0.6
4,390,113	+				-1.0
4,390,113	+				-1.2
4,390,113	+				+0.1
4,390,113	+				-0.6
4,390,113	+				-1.6
4,390,114	-				-0.2
4,390,114	-				-0.2
4,390,114	-				-1.1
4,390,120	-				-0.3
4,390,149	+				-1.4
4,390,149	+				+0.2
4,390,174	+				-1.8
4,390,180	+				-1.0
4,390,180	+				-0.3
4,390,180	+				-0.5
4,390,181	-				-0.0
4,390,181	-				+0.4
4,390,188	+				-0.4
4,390,188	+				+0.4
4,390,188	+				+0.5
4,390,189	-				+0.2
4,390,189	-				-1.0
4,390,189	-				+0.5
4,390,189	-				+0.7
4,390,192	+				+0.9
4,390,193	-				+0.5
4,390,193	-				+0.8
4,390,193	-				+0.4
4,390,193	-				+0.0
4,390,193	-				-1.1
4,390,193	-				-0.5
4,390,263	+				-0.7
4,390,263	+				-0.4
4,390,278	+		HER17_RS19540	0.13	-0.2
4,390,279	-		HER17_RS19540	0.13	+0.2
4,390,279	-		HER17_RS19540	0.13	-0.0
4,390,279	-		HER17_RS19540	0.13	+0.8
4,390,279	-		HER17_RS19540	0.13	-0.8