Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS17210

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,874,661	+		HER17_RS17205	0.53	+0.3
3,874,661	+		HER17_RS17205	0.53	+1.8
3,874,662	-		HER17_RS17205	0.53	+0.1
3,874,760	-		HER17_RS17205	0.58	+0.0
3,874,760	-		HER17_RS17205	0.58	-0.5
3,874,760	-		HER17_RS17205	0.58	+0.6
3,874,768	-		HER17_RS17205	0.59	-0.2
3,874,768	-		HER17_RS17205	0.59	-0.1
3,874,784	+		HER17_RS17205	0.60	+0.3
3,874,784	+		HER17_RS17205	0.60	+0.3
3,874,990	-		HER17_RS17205	0.70	-1.8
3,875,025	+		HER17_RS17205	0.72	-0.0
3,875,026	-		HER17_RS17205	0.72	+0.6
3,875,057	+		HER17_RS17205	0.74	-1.5
3,875,057	+		HER17_RS17205	0.74	+0.7
3,875,058	-		HER17_RS17205	0.74	+0.1
3,875,058	-		HER17_RS17205	0.74	+0.4
3,875,058	-		HER17_RS17205	0.74	-0.0
3,875,058	-		HER17_RS17205	0.74	-0.7
3,875,067	-		HER17_RS17205	0.74	+0.3
3,875,067	-		HER17_RS17205	0.74	-0.9
3,875,067	-		HER17_RS17205	0.74	-0.1
3,875,087	+		HER17_RS17205	0.75	+0.2
3,875,087	+		HER17_RS17205	0.75	+0.6
3,875,088	-		HER17_RS17205	0.75	+0.3
3,875,133	-		HER17_RS17205	0.78	+0.4
3,875,243	-		HER17_RS17205	0.83	-0.2
3,875,315	+		HER17_RS17205	0.87	-0.0
3,875,315	+		HER17_RS17205	0.87	+0.1
3,875,316	-		HER17_RS17205	0.87	-0.4
3,875,448	+				+0.7
3,875,449	-				+0.1
3,875,449	-				+0.0
3,875,449	-				+0.3
3,875,569	-				-0.1
3,875,593	+				-0.2
3,875,593	+				+0.1
3,875,603	-				-1.8
3,875,609	-				-0.6
3,875,632	+				-0.0
3,875,633	-				-0.0
3,875,840	+		HER17_RS17210	0.26	-0.4
3,875,840	+		HER17_RS17210	0.26	+0.1
3,875,840	+		HER17_RS17210	0.26	+0.7
3,875,840	+		HER17_RS17210	0.26	-0.5
3,875,840	+		HER17_RS17210	0.26	-1.4
3,875,841	-		HER17_RS17210	0.27	-0.1
3,875,841	-		HER17_RS17210	0.27	-1.3
3,875,841	-		HER17_RS17210	0.27	+0.4
3,875,842	+		HER17_RS17210	0.27	-1.0
3,875,842	+		HER17_RS17210	0.27	-0.3
3,875,842	+		HER17_RS17210	0.27	+0.1
3,875,842	+		HER17_RS17210	0.27	-0.5
3,875,843	-		HER17_RS17210	0.27	+0.1
3,875,843	-		HER17_RS17210	0.27	+0.6
3,875,843	-		HER17_RS17210	0.27	+0.6
3,875,843	-		HER17_RS17210	0.27	+0.4
3,875,895	+		HER17_RS17210	0.33	+0.4
3,875,906	+		HER17_RS17210	0.34	+0.8
3,876,159	+		HER17_RS17210	0.63	+0.1
3,876,159	+		HER17_RS17210	0.63	+0.3
3,876,160	-		HER17_RS17210	0.63	-0.5
3,876,199	+		HER17_RS17210	0.67	-0.1
3,876,199	+		HER17_RS17210	0.67	+0.4
3,876,199	+		HER17_RS17210	0.67	+1.0
3,876,199	+		HER17_RS17210	0.67	+0.4
3,876,200	-		HER17_RS17210	0.67	-0.2
3,876,200	-		HER17_RS17210	0.67	+0.2
3,876,243	+		HER17_RS17210	0.72	-0.5
3,876,243	+		HER17_RS17210	0.72	+0.6
3,876,387	-		HER17_RS17210	0.88	-0.1
3,876,432	+				-0.3
3,876,432	+				+1.7
3,876,433	-				+0.6
3,876,461	+				-0.4
3,876,462	-				-0.2
3,876,462	-				-0.7
3,876,467	+				+0.4
3,876,467	+				+0.1
3,876,467	+				+0.3
3,876,467	+				+0.1
3,876,467	+				+0.0
3,876,468	-				+0.1
3,876,468	-				-0.3
3,876,468	-				+1.2
3,876,468	-				-0.8
3,876,500	+				+0.1
3,876,519	-				-0.2
3,876,519	-				-0.1
3,876,565	+				-0.1
3,876,575	+				-0.6
3,876,575	+				-0.6
3,876,600	-				+0.7
3,876,801	+		HER17_RS17215	0.16	+0.4
3,876,801	+		HER17_RS17215	0.16	-0.5
3,876,801	+		HER17_RS17215	0.16	-0.3
3,876,802	-		HER17_RS17215	0.16	+0.4
3,876,803	+		HER17_RS17215	0.16	+0.2
3,876,803	+		HER17_RS17215	0.16	-0.0
3,876,843	-		HER17_RS17215	0.20	-0.1
3,876,895	+		HER17_RS17215	0.26	+1.0
3,876,895	+		HER17_RS17215	0.26	-0.8
3,876,926	+		HER17_RS17215	0.30	+0.2
3,876,927	-		HER17_RS17215	0.30	+0.6
3,876,927	-		HER17_RS17215	0.30	+1.0
3,876,945	+		HER17_RS17215	0.32	-0.5
3,877,166	+		HER17_RS17215	0.56	+1.3
3,877,167	-		HER17_RS17215	0.57	+1.6
3,877,167	-		HER17_RS17215	0.57	-0.2
3,877,167	-		HER17_RS17215	0.57	-0.6
3,877,179	-		HER17_RS17215	0.58	-0.6
3,877,179	-		HER17_RS17215	0.58	-0.3
3,877,179	-		HER17_RS17215	0.58	-2.4
3,877,230	+		HER17_RS17215	0.64	-0.1
3,877,309	+		HER17_RS17215	0.72	-0.1
3,877,427	-		HER17_RS17215	0.86	+0.1
3,877,438	+		HER17_RS17215	0.87	-0.6
3,877,438	+		HER17_RS17215	0.87	+0.5
3,877,438	+		HER17_RS17215	0.87	-0.7
3,877,438	+		HER17_RS17215	0.87	+0.6
3,877,439	-		HER17_RS17215	0.87	-0.8
3,877,439	-		HER17_RS17215	0.87	-0.1
3,877,439	-		HER17_RS17215	0.87	-0.2
3,877,456	+		HER17_RS17215	0.89	+0.2
3,877,456	+		HER17_RS17215	0.89	-0.0
3,877,457	-		HER17_RS17215	0.89	-0.4