Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS16965

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,816,307	+		HER17_RS16960	0.77	-0.5
3,816,307	+		HER17_RS16960	0.77	+0.0
3,816,308	-		HER17_RS16960	0.77	+0.3
3,816,308	-		HER17_RS16960	0.77	+0.6
3,816,315	+		HER17_RS16960	0.78	-0.6
3,816,390	+		HER17_RS16960	0.81	+0.6
3,816,394	+		HER17_RS16960	0.81	+0.2
3,816,394	+		HER17_RS16960	0.81	-1.4
3,816,394	+		HER17_RS16960	0.81	-0.3
3,816,395	-		HER17_RS16960	0.81	+0.6
3,816,420	+		HER17_RS16960	0.82	+1.0
3,816,421	-		HER17_RS16960	0.82	+0.1
3,816,421	-		HER17_RS16960	0.82	-0.4
3,816,421	-		HER17_RS16960	0.82	-0.6
3,816,449	-		HER17_RS16960	0.83	-0.4
3,816,512	-		HER17_RS16960	0.86	-0.2
3,816,600	+				+0.4
3,816,600	+				+0.4
3,816,647	-				+1.1
3,816,647	-				+0.8
3,816,758	+				-0.1
3,816,758	+				+0.1
3,816,811	+				-0.5
3,816,812	-				+0.1
3,816,823	+				+0.2
3,816,823	+				-0.5
3,816,823	+				-0.4
3,816,823	+				+0.1
3,816,823	+				-1.0
3,816,823	+				-0.8
3,816,823	+				-0.6
3,816,823	+				-0.7
3,816,824	-				-1.1
3,816,824	-				-1.4
3,816,824	-				+0.1
3,816,824	-				+0.0
3,816,824	-				-0.1
3,816,824	-				-0.2
3,816,824	-				+0.7
3,816,824	-				+0.5
3,816,824	-				+1.0
3,816,824	-				-1.0
3,816,824	-				-0.3
3,816,824	-				+0.6
3,816,825	+				+0.6
3,816,908	-				+0.5
3,816,942	+				-0.0
3,817,030	+				-0.7
3,817,031	-				+0.6
3,817,151	-		HER17_RS16965	0.13	+0.1
3,817,151	-		HER17_RS16965	0.13	-0.1
3,817,285	-		HER17_RS16965	0.28	+0.1
3,817,428	-		HER17_RS16965	0.43	-0.0
3,817,479	+		HER17_RS16965	0.49	+0.2
3,817,479	+		HER17_RS16965	0.49	+0.6
3,817,479	+		HER17_RS16965	0.49	-0.2
3,817,480	-		HER17_RS16965	0.49	-0.2
3,817,480	-		HER17_RS16965	0.49	-0.2
3,817,481	+		HER17_RS16965	0.49	-0.2
3,817,481	+		HER17_RS16965	0.49	-0.9
3,817,481	+		HER17_RS16965	0.49	-0.4
3,817,481	+		HER17_RS16965	0.49	+0.4
3,817,481	+		HER17_RS16965	0.49	-1.6
3,817,482	-		HER17_RS16965	0.49	+0.3
3,817,482	-		HER17_RS16965	0.49	+0.6
3,817,482	-		HER17_RS16965	0.49	+0.6
3,817,542	-		HER17_RS16965	0.55	-0.7
3,817,542	-		HER17_RS16965	0.55	-0.1
3,817,606	-		HER17_RS16965	0.62	+0.5
3,817,633	+		HER17_RS16965	0.65	+0.6
3,817,633	+		HER17_RS16965	0.65	+0.3
3,817,633	+		HER17_RS16965	0.65	+0.5
3,817,633	+		HER17_RS16965	0.65	+0.6
3,817,634	-		HER17_RS16965	0.65	-0.3
3,817,634	-		HER17_RS16965	0.65	-0.0
3,817,634	-		HER17_RS16965	0.65	+0.3
3,817,634	-		HER17_RS16965	0.65	-0.3
3,817,634	-		HER17_RS16965	0.65	+0.1
3,817,637	+		HER17_RS16965	0.66	+0.4
3,817,637	+		HER17_RS16965	0.66	+1.0
3,817,637	+		HER17_RS16965	0.66	-0.4
3,817,637	+		HER17_RS16965	0.66	-0.4
3,817,638	-		HER17_RS16965	0.66	-0.9
3,817,638	-		HER17_RS16965	0.66	+1.2
3,817,662	+		HER17_RS16965	0.68	+0.8
3,817,704	+		HER17_RS16965	0.73	+0.2
3,817,806	+		HER17_RS16965	0.84	+1.1
3,817,806	+		HER17_RS16965	0.84	+0.4
3,817,807	-		HER17_RS16965	0.84	-0.8
3,817,807	-		HER17_RS16965	0.84	-0.7
3,817,812	+		HER17_RS16965	0.84	-1.4
3,817,813	-		HER17_RS16965	0.85	+0.1
3,817,813	-		HER17_RS16965	0.85	+0.1
3,817,831	+		HER17_RS16965	0.87	+1.5
3,817,831	+		HER17_RS16965	0.87	-0.1
3,817,831	+		HER17_RS16965	0.87	-0.5
3,817,832	-		HER17_RS16965	0.87	-0.4
3,817,832	-		HER17_RS16965	0.87	-0.5
3,817,832	-		HER17_RS16965	0.87	-2.0
3,817,835	-		HER17_RS16965	0.87	+0.5
3,817,923	-				-0.1
3,817,955	+				-0.4
3,817,956	-				-0.1
3,817,956	-				-0.5
3,817,956	-				+0.4
3,817,956	-				-0.1
3,818,513	-		HER17_RS16970	0.46	-1.9
3,818,550	+		HER17_RS16970	0.50	-1.1
3,818,550	+		HER17_RS16970	0.50	-0.4
3,818,752	-		HER17_RS16970	0.73	-0.8