Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS15930

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,577,059	+		HER17_RS15920	0.66	-1.1
3,577,175	-		HER17_RS15920	0.74	+1.4
3,577,175	-		HER17_RS15920	0.74	+0.0
3,577,200	+		HER17_RS15920	0.76	-0.4
3,577,201	-		HER17_RS15920	0.76	+0.3
3,577,201	-		HER17_RS15920	0.76	-0.4
3,577,254	-		HER17_RS15920	0.80	-0.3
3,577,254	-		HER17_RS15920	0.80	+1.4
3,577,278	+		HER17_RS15920	0.82	+1.0
3,577,278	+		HER17_RS15920	0.82	+0.3
3,577,279	-		HER17_RS15920	0.82	-0.5
3,577,279	-		HER17_RS15920	0.82	-0.2
3,577,279	-		HER17_RS15920	0.82	+0.3
3,577,399	-		HER17_RS15920	0.90	+0.6
3,577,436	+				-0.2
3,577,436	+				-1.5
3,577,436	+				-0.3
3,577,436	+				-2.3
3,577,436	+				+0.4
3,577,437	-				-0.8
3,577,437	-				+0.8
3,577,444	+				-0.3
3,577,445	-				-1.0
3,577,445	-				-0.3
3,577,447	+				+0.7
3,577,447	+				-1.3
3,577,448	-				-0.4
3,577,480	-				-0.5
3,577,530	+				-0.1
3,577,531	-				-0.0
3,577,531	-				+0.0
3,577,531	-				-1.7
3,577,536	+				+0.1
3,577,536	+				-1.6
3,577,559	-				-0.6
3,577,643	-				-0.2
3,577,648	+				+0.5
3,577,648	+				+1.1
3,577,668	-				-1.0
3,577,668	-				+1.6
3,577,669	+				-0.5
3,577,670	-				+0.1
3,577,670	-				+0.8
3,577,675	+				+0.9
3,577,675	+				+0.5
3,577,675	+				+0.3
3,577,675	+				+0.1
3,577,675	+				+0.1
3,577,675	+				+0.7
3,577,675	+				+0.4
3,577,678	-				+0.2
3,577,678	-				-0.0
3,577,678	-				+0.5
3,577,685	+				+0.7
3,577,685	+				+1.4
3,577,685	+				+0.1
3,577,685	+				+0.3
3,577,686	-				-1.5
3,577,686	-				-0.0
3,577,687	+				-0.6
3,577,687	+				-0.6
3,577,687	+				-0.4
3,577,687	+				-0.3
3,577,687	+				-0.1
3,577,707	+				+0.9
3,577,772	+				+0.3
3,577,772	+				-0.1
3,577,774	+				-0.3
3,577,774	+				+0.2
3,577,774	+				-0.7
3,577,904	+		HER17_RS15925	0.43	-0.8
3,578,952	+				+0.0
3,578,952	+				+1.1
3,578,952	+				+0.5
3,578,952	+				-0.1
3,578,952	+				+0.5
3,578,956	+				-0.6
3,578,956	+				-1.3
3,578,956	+				-1.1
3,578,956	+				+2.0
3,578,960	+				-1.4