Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS15460

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,464,529	+		HER17_RS15455	0.49	-0.1
3,464,529	+		HER17_RS15455	0.49	+0.3
3,464,529	+		HER17_RS15455	0.49	+0.3
3,464,530	-		HER17_RS15455	0.49	+0.7
3,464,530	-		HER17_RS15455	0.49	+0.8
3,464,531	+		HER17_RS15455	0.49	+0.1
3,464,532	-		HER17_RS15455	0.49	+0.6
3,464,532	-		HER17_RS15455	0.49	-0.5
3,464,532	-		HER17_RS15455	0.49	+0.1
3,464,610	-		HER17_RS15455	0.55	+1.1
3,464,610	-		HER17_RS15455	0.55	-0.2
3,464,862	+		HER17_RS15455	0.75	-1.1
3,464,901	+		HER17_RS15455	0.78	-0.1
3,464,902	-		HER17_RS15455	0.78	+0.3
3,464,904	+		HER17_RS15455	0.78	-0.3
3,464,904	+		HER17_RS15455	0.78	+0.6
3,464,905	-		HER17_RS15455	0.78	+0.7
3,464,905	-		HER17_RS15455	0.78	-0.2
3,464,905	-		HER17_RS15455	0.78	-0.2
3,464,927	+		HER17_RS15455	0.80	-0.4
3,464,985	-		HER17_RS15455	0.84	-0.3
3,464,985	-		HER17_RS15455	0.84	+0.1
3,465,013	+		HER17_RS15455	0.87	+0.6
3,465,017	+		HER17_RS15455	0.87	-1.6
3,465,018	-		HER17_RS15455	0.87	+0.4
3,465,018	-		HER17_RS15455	0.87	+0.0
3,465,050	-		HER17_RS15455	0.89	+0.7
3,465,142	+				+0.6
3,465,143	-				-1.1
3,465,143	-				+0.7
3,465,202	+				-0.2
3,465,202	+				+0.3
3,465,203	-				-0.1
3,465,203	-				+0.0
3,465,203	-				+0.7
3,465,203	-				-1.1
3,465,211	+				+1.3
3,465,211	+				+0.2
3,465,211	+				-1.0
3,465,211	+				+0.0
3,465,211	+				+0.6
3,465,212	-				+0.8
3,465,212	-				-0.1
3,465,215	+				-0.1
3,465,215	+				+0.5
3,465,215	+				+0.5
3,465,216	-				+0.4
3,465,216	-				-0.1
3,465,216	-				+0.5
3,465,216	-				+0.9
3,465,216	-				-0.2
3,465,228	-				-0.0
3,465,243	-				-1.2
3,465,291	+				-0.2
3,465,291	+				-0.6
3,465,291	+				+0.5
3,465,291	+				-0.6
3,465,291	+				+0.1
3,465,292	-				+0.7
3,465,292	-				+1.5
3,465,295	-				+0.4
3,465,295	-				-1.4
3,465,295	-				-1.0
3,465,335	+				-0.2
3,465,354	-				+0.7
3,465,358	-				+1.9
3,465,429	+				-0.7
3,465,460	+				+0.5
3,465,477	-				+0.8
3,465,477	-				+0.9
3,465,497	-				+0.7
3,465,510	-				+0.5
3,465,510	-				-0.3
3,465,510	-				+0.5
3,465,516	+				-1.0
3,465,568	-				-0.4
3,465,568	-				-0.1
3,465,606	+		HER17_RS15460	0.15	-0.8
3,465,678	+		HER17_RS15460	0.26	-0.0
3,465,805	-		HER17_RS15460	0.46	-0.5
3,465,805	-		HER17_RS15460	0.46	+0.7
3,465,805	-		HER17_RS15460	0.46	+0.7
3,465,838	-		HER17_RS15460	0.52	-0.4
3,465,838	-		HER17_RS15460	0.52	+0.1
3,466,020	+		HER17_RS15460	0.81	+0.1
3,466,020	+		HER17_RS15460	0.81	-0.6
3,466,069	+		HER17_RS15460	0.88	+0.3
3,466,069	+		HER17_RS15460	0.88	+0.3
3,466,070	-		HER17_RS15460	0.89	+0.2
3,466,072	+		HER17_RS15460	0.89	-0.9
3,466,073	-		HER17_RS15460	0.89	+1.3
3,466,073	-		HER17_RS15460	0.89	-0.1
3,466,073	-		HER17_RS15460	0.89	+0.2
3,466,076	-		HER17_RS15460	0.89	-1.6
3,466,097	+				-0.2
3,466,097	+				-0.5
3,466,097	+				-0.0
3,466,098	-				+0.1
3,466,145	+				-0.6
3,466,145	+				-1.0
3,466,146	-				+0.2
3,466,260	+				+0.1
3,466,261	-				+0.1
3,466,263	-				-0.6
3,466,279	-				+0.7
3,466,279	-				+0.3
3,466,292	+				-0.9
3,466,292	+				+0.5
3,466,382	-				+0.0
3,466,396	-				+1.2
3,466,405	+				-0.4
3,466,419	+				+0.2
3,466,419	+				-0.8
3,466,419	+				+0.5
3,466,419	+				-1.1
3,466,420	-				-0.1
3,466,420	-				+1.6
3,466,449	-				+0.8
3,466,503	+				-1.1
3,466,504	-				-0.5
3,466,547	-				-0.1
3,466,553	+				-0.2
3,466,553	+				+0.0
3,466,564	+				+1.0
3,466,564	+				-0.5
3,466,565	-				+0.1
3,466,592	+		HER17_RS15465	0.11	+0.6
3,466,592	+		HER17_RS15465	0.11	-0.8
3,466,924	-		HER17_RS15465	0.43	-0.6
3,466,924	-		HER17_RS15465	0.43	-0.6
3,466,924	-		HER17_RS15465	0.43	+1.3
3,466,924	-		HER17_RS15465	0.43	-0.4
3,466,924	-		HER17_RS15465	0.43	-0.3
3,467,123	+		HER17_RS15465	0.62	-0.5