Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS15410

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,454,770	-				-0.3
3,454,770	-				+0.3
3,454,770	-				-0.1
3,454,805	-				+1.4
3,454,830	-				-0.6
3,454,833	+				-0.2
3,454,855	+				+0.1
3,454,934	+				+0.6
3,454,934	+				-0.5
3,454,934	+				+1.2
3,454,935	-				+0.1
3,454,977	+		HER17_RS15405	0.12	-0.5
3,455,141	+		HER17_RS15405	0.35	-0.4
3,455,141	+		HER17_RS15405	0.35	-1.6
3,455,142	-		HER17_RS15405	0.35	-0.7
3,455,142	-		HER17_RS15405	0.35	+0.2
3,455,302	+		HER17_RS15405	0.57	-0.8
3,455,303	-		HER17_RS15405	0.57	+0.5
3,455,303	-		HER17_RS15405	0.57	-2.0
3,455,514	+		HER17_RS15405	0.87	-0.1
3,455,514	+		HER17_RS15405	0.87	+0.3
3,455,515	-		HER17_RS15405	0.87	+1.2
3,455,539	+				+0.4
3,455,539	+				-0.0
3,455,540	-				-1.0
3,455,540	-				-1.1
3,455,540	-				-1.2
3,455,561	+				+0.6
3,455,585	+				+0.7
3,455,611	+				+0.1
3,455,612	-				+2.4
3,455,612	-				+0.7
3,455,615	+				+0.9
3,455,615	+				-0.2
3,455,641	+				-0.3
3,455,745	+				-0.0
3,455,746	-				-0.0
3,455,746	-				+0.8
3,455,752	+				+0.5
3,455,752	+				+1.5
3,455,752	+				-1.5
3,455,813	+				-0.2
3,455,814	-				-0.1
3,455,814	-				+0.3
3,455,856	+		HER17_RS15410	0.10	-1.1
3,455,878	+		HER17_RS15410	0.12	+0.4
3,455,947	+		HER17_RS15410	0.19	-0.4
3,456,043	+		HER17_RS15410	0.28	+0.6
3,456,077	+		HER17_RS15410	0.31	+1.1
3,456,170	+		HER17_RS15410	0.40	-0.3
3,456,197	-		HER17_RS15410	0.43	+0.1
3,456,243	+		HER17_RS15410	0.47	-1.2
3,456,316	+		HER17_RS15410	0.54	-0.1
3,456,465	+		HER17_RS15410	0.69	+0.1
3,456,483	-		HER17_RS15410	0.71	+0.6
3,456,588	+		HER17_RS15410	0.81	-0.1
3,456,589	-		HER17_RS15410	0.81	-0.5
3,456,589	-		HER17_RS15410	0.81	+0.2
3,456,590	+		HER17_RS15410	0.81	+0.6
3,456,590	+		HER17_RS15410	0.81	-1.5
3,456,590	+		HER17_RS15410	0.81	-0.3
3,456,591	-		HER17_RS15410	0.81	-0.0
3,456,595	+		HER17_RS15410	0.81	-2.4
3,456,595	+		HER17_RS15410	0.81	-1.0
3,456,595	+		HER17_RS15410	0.81	-0.5
3,456,596	-		HER17_RS15410	0.81	-0.5
3,456,596	-		HER17_RS15410	0.81	+0.0
3,456,696	-				-0.1
3,456,696	-				+0.3
3,456,696	-				-0.9
3,456,696	-				+0.4
3,456,697	+				-0.2
3,456,697	+				-0.2
3,456,697	+				+0.0
3,456,775	-				-1.9
3,456,782	-				+0.2
3,456,789	+				+0.3
3,456,790	-				+0.1
3,457,731	-				+0.7
3,457,731	-				-0.1
3,457,759	+				+0.2
3,457,759	+				+0.1
3,457,759	+				+0.5
3,457,759	+				-0.1
3,457,759	+				+0.7
3,457,760	-				-0.9