Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS15390

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,450,802	+		HER17_RS15385	0.44	+0.3
3,450,803	-		HER17_RS15385	0.44	-0.5
3,450,934	+		HER17_RS15385	0.54	+0.5
3,450,983	-		HER17_RS15385	0.58	-0.3
3,451,139	-		HER17_RS15385	0.70	+0.5
3,451,139	-		HER17_RS15385	0.70	+0.1
3,451,150	+		HER17_RS15385	0.71	-0.5
3,451,177	+		HER17_RS15385	0.73	-0.5
3,451,177	+		HER17_RS15385	0.73	+0.3
3,451,178	-		HER17_RS15385	0.73	-0.2
3,451,178	-		HER17_RS15385	0.73	-0.2
3,451,178	-		HER17_RS15385	0.73	-0.4
3,451,178	-		HER17_RS15385	0.73	+0.1
3,451,178	-		HER17_RS15385	0.73	+1.3
3,451,178	-		HER17_RS15385	0.73	+0.2
3,451,181	+		HER17_RS15385	0.74	+0.4
3,451,181	+		HER17_RS15385	0.74	+0.1
3,451,181	+		HER17_RS15385	0.74	-0.2
3,451,181	+		HER17_RS15385	0.74	+0.6
3,451,181	+		HER17_RS15385	0.74	-0.1
3,451,182	-		HER17_RS15385	0.74	+1.0
3,451,182	-		HER17_RS15385	0.74	+0.1
3,451,182	-		HER17_RS15385	0.74	+0.3
3,451,410	+				-0.3
3,451,411	-				-0.8
3,451,411	-				-0.4
3,451,432	+				+0.7
3,451,432	+				+0.2
3,451,433	-				-0.9
3,451,520	+				+0.6
3,451,521	-				-0.0
3,451,521	-				-1.2
3,451,655	+				-2.0
3,451,667	-				-0.3
3,451,808	+		HER17_RS15390	0.28	-1.9
3,451,809	-		HER17_RS15390	0.28	-0.5
3,451,809	-		HER17_RS15390	0.28	+0.2
3,451,812	+		HER17_RS15390	0.29	+0.1
3,451,812	+		HER17_RS15390	0.29	+0.3
3,451,812	+		HER17_RS15390	0.29	+0.1
3,451,812	+		HER17_RS15390	0.29	-0.1
3,451,813	-		HER17_RS15390	0.29	+0.5
3,451,813	-		HER17_RS15390	0.29	-0.1
3,451,813	-		HER17_RS15390	0.29	-0.1
3,451,813	-		HER17_RS15390	0.29	+0.6
3,451,813	-		HER17_RS15390	0.29	-0.1
3,451,892	+		HER17_RS15390	0.51	-1.5
3,451,893	-		HER17_RS15390	0.51	-0.2
3,452,008	+		HER17_RS15390	0.82	+0.5
3,452,019	+		HER17_RS15390	0.85	-1.5
3,452,019	+		HER17_RS15390	0.85	+0.5
3,452,020	-		HER17_RS15390	0.85	-0.6
3,452,020	-		HER17_RS15390	0.85	-0.8
3,452,091	+				+0.1
3,452,091	+				+0.2
3,452,091	+				+0.1
3,452,092	-				+1.1
3,452,092	-				-0.3
3,452,092	-				-0.1
3,452,092	-				-0.5
3,452,093	+				+0.4
3,452,093	+				-0.2
3,452,093	+				-0.4
3,452,094	-				+0.2
3,452,102	+				-0.0
3,452,102	+				+0.7
3,452,103	-				+0.2
3,452,115	+				+0.1
3,452,115	+				+0.1
3,452,115	+				+0.8
3,452,144	+				-0.2
3,452,145	-				+0.3
3,452,145	-				-0.2
3,452,166	-				+0.0
3,452,449	+		HER17_RS15395	0.15	-1.2
3,452,684	-		HER17_RS15395	0.26	-0.3
3,452,694	+		HER17_RS15395	0.26	-0.4
3,452,694	+		HER17_RS15395	0.26	+0.1
3,452,694	+		HER17_RS15395	0.26	-1.1
3,452,695	-		HER17_RS15395	0.27	-0.2
3,452,695	-		HER17_RS15395	0.27	-0.4
3,452,738	+		HER17_RS15395	0.29	+1.2
3,452,738	+		HER17_RS15395	0.29	-0.1
3,452,766	+		HER17_RS15395	0.30	+0.1
3,452,807	+		HER17_RS15395	0.32	+1.5
3,452,807	+		HER17_RS15395	0.32	+0.0
3,452,980	+		HER17_RS15395	0.40	+0.2
3,452,980	+		HER17_RS15395	0.40	+0.5
3,452,980	+		HER17_RS15395	0.40	+0.3
3,452,981	-		HER17_RS15395	0.40	+0.2
3,452,981	-		HER17_RS15395	0.40	+0.5
3,452,981	-		HER17_RS15395	0.40	+0.4
3,452,981	-		HER17_RS15395	0.40	+0.4
3,452,981	-		HER17_RS15395	0.40	-0.3
3,453,028	+		HER17_RS15395	0.43	-0.1
3,453,028	+		HER17_RS15395	0.43	-0.3
3,453,029	-		HER17_RS15395	0.43	-0.1