Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS15290

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,427,670	+				-0.8
3,427,670	+				-0.5
3,427,670	+				-0.0
3,427,670	+				-0.9
3,427,670	+				-0.0
3,427,670	+				-0.5
3,427,670	+				+0.9
3,427,672	+				-0.7
3,427,672	+				+0.6
3,427,672	+				+0.4
3,427,672	+				-0.8
3,427,672	+				+0.3
3,427,676	+				+0.1
3,427,677	-				-0.9
3,427,677	-				+0.2
3,427,677	-				-0.9
3,427,677	-				+0.6
3,427,677	-				+0.4
3,427,711	+				+1.7
3,427,711	+				-0.3
3,427,719	+				-0.1
3,427,719	+				+1.2
3,427,720	-				+0.2
3,427,762	-				+0.2
3,427,784	+				-1.9
3,427,785	-				+0.4
3,427,819	-				-0.8
3,427,822	-				-1.5
3,427,888	-				-1.3
3,427,914	+				+0.1
3,427,914	+				-0.5
3,427,914	+				-0.5
3,427,979	+				+0.5
3,427,979	+				+1.7
3,427,980	-				+0.7
3,427,980	-				+0.1
3,427,984	-				-3.3
3,428,007	+				+0.9
3,428,007	+				+1.3
3,428,013	+				-0.0
3,428,013	+				+0.4
3,428,013	+				+0.5
3,428,014	-				-0.3
3,428,014	-				+0.4
3,428,014	-				+0.1
3,428,016	+				+0.4
3,428,017	-				-0.3
3,428,017	-				-0.7
3,428,017	-				+1.3
3,428,017	-				-1.3
3,428,021	+				-0.1
3,428,030	+				+0.7
3,428,031	-				-0.2
3,428,031	-				+0.6
3,428,034	+				+0.4
3,428,035	-				-0.3
3,428,035	-				-0.6
3,428,035	-				+3.1
3,428,214	+		HER17_RS15285	0.54	-0.3
3,428,279	+		HER17_RS15285	0.71	-0.1
3,428,279	+		HER17_RS15285	0.71	+0.1
3,428,475	-				-0.8
3,428,475	-				-0.4
3,428,475	-				-0.4
3,428,534	-		HER17_RS15290	0.29	+0.9
3,428,659	-		HER17_RS15290	0.89	+0.5
3,428,659	-		HER17_RS15290	0.89	-1.1
3,428,659	-		HER17_RS15290	0.89	-0.1
3,428,690	-				+1.3
3,428,695	+				-0.4
3,428,695	+				-1.1
3,428,695	+				-1.1
3,428,696	-				-0.3
3,428,729	-				-0.1
3,428,733	+				-2.2
3,428,733	+				-1.5
3,428,733	+				-0.3
3,428,733	+				-0.1
3,428,733	+				-0.3
3,428,741	+				+0.5
3,428,741	+				-0.1
3,428,741	+				-0.1
3,428,741	+				-0.7
3,428,742	-				-0.1
3,428,742	-				-0.1
3,428,742	-				+0.8
3,428,742	-				+0.3
3,428,742	-				+0.1
3,428,742	-				-0.3
3,428,742	-				+0.3
3,428,742	-				+0.7
3,428,803	-				+0.1
3,428,978	+		HER17_RS15295	0.11	-0.7
3,428,978	+		HER17_RS15295	0.11	-0.4
3,429,093	+		HER17_RS15295	0.27	+0.3
3,429,093	+		HER17_RS15295	0.27	-0.1
3,429,094	-		HER17_RS15295	0.27	-0.1
3,429,152	-		HER17_RS15295	0.35	-0.2
3,429,166	+		HER17_RS15295	0.37	-0.8
3,429,166	+		HER17_RS15295	0.37	-0.5
3,429,167	-		HER17_RS15295	0.38	+0.1
3,429,167	-		HER17_RS15295	0.38	-0.5
3,429,167	-		HER17_RS15295	0.38	+0.4
3,429,389	+		HER17_RS15295	0.69	+0.5
3,429,390	-		HER17_RS15295	0.69	+0.9
3,429,415	+		HER17_RS15295	0.72	-0.4
3,429,416	-		HER17_RS15295	0.73	-1.5
3,429,416	-		HER17_RS15295	0.73	-0.1
3,429,438	-		HER17_RS15295	0.76	+0.2
3,429,438	-		HER17_RS15295	0.76	+0.3
3,429,438	-		HER17_RS15295	0.76	-1.4
3,429,514	-		HER17_RS15295	0.86	-0.6
3,429,514	-		HER17_RS15295	0.86	-0.0
3,429,644	+				+1.4
3,429,644	+				+0.4