Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS15125

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,399,143	+		HER17_RS15120	0.60	-0.2
3,399,221	-		HER17_RS15120	0.64	+0.1
3,399,227	-		HER17_RS15120	0.65	+0.1
3,399,276	+		HER17_RS15120	0.68	-0.8
3,399,298	+		HER17_RS15120	0.69	-0.7
3,399,467	-		HER17_RS15120	0.79	-0.0
3,399,524	-		HER17_RS15120	0.83	-0.9
3,399,582	-		HER17_RS15120	0.86	+1.6
3,399,582	-		HER17_RS15120	0.86	-2.3
3,399,607	+		HER17_RS15120	0.88	-0.3
3,399,607	+		HER17_RS15120	0.88	-0.3
3,399,634	+		HER17_RS15120	0.89	+0.1
3,399,805	+				-0.1
3,399,811	+				+0.8
3,399,811	+				+0.9
3,399,812	-				+0.8
3,399,868	-				-0.9
3,399,868	-				-2.4
3,399,868	-				-0.5
3,399,934	+				-0.9
3,399,934	+				-0.5
3,399,935	-				-0.5
3,399,935	-				+0.7
3,400,344	+				-0.7
3,400,444	+				-0.3
3,400,446	+				-0.2
3,400,533	+		HER17_RS15145	0.47	-0.7
3,400,533	+		HER17_RS15145	0.47	-0.2
3,400,717	+				-0.2
3,400,726	+				-0.6
3,400,729	+				+0.2
3,400,730	-				+0.1
3,400,734	+				+0.4
3,400,734	+				-0.2
3,400,734	+				+0.3
3,400,734	+				+0.3
3,400,734	+				-0.1
3,400,734	+				-0.2
3,400,735	-				+0.1
3,400,735	-				-0.7
3,400,746	-				-0.1
3,400,750	+				-0.5
3,400,750	+				+0.1
3,400,750	+				+0.6
3,400,750	+				-0.7
3,400,750	+				+0.4
3,400,750	+				-0.1
3,400,750	+				-0.5
3,400,751	-				+0.4
3,400,751	-				-0.1
3,400,751	-				+0.5
3,400,751	-				-0.6
3,400,751	-				-0.6
3,400,751	-				+1.8
3,400,751	-				-1.5
3,400,751	-				+0.2
3,400,799	+				+0.1
3,400,803	+				-0.2
3,400,803	+				+0.4
3,400,803	+				+0.4
3,400,803	+				+0.7
3,400,804	-				+0.3
3,400,804	-				-1.2
3,400,804	-				+0.2
3,400,816	-				-1.0
3,400,816	-				-1.4
3,400,895	+		HER17_RS15155	0.17	+0.1
3,400,908	-		HER17_RS15155	0.19	-0.5
3,400,938	+		HER17_RS15155	0.24	-0.2
3,400,939	-		HER17_RS15155	0.24	-0.1
3,400,948	+		HER17_RS15155	0.26	+0.4
3,400,948	+		HER17_RS15155	0.26	+0.1
3,400,948	+		HER17_RS15155	0.26	-0.2
3,400,971	+		HER17_RS15155	0.30	+1.3
3,400,972	-		HER17_RS15155	0.30	-0.0
3,400,972	-		HER17_RS15155	0.30	+0.1
3,401,029	-		HER17_RS15155	0.39	-0.0
3,401,038	-		HER17_RS15155	0.40	+0.0
3,401,050	-		HER17_RS15155	0.42	-0.2