Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS13400

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,969,224	+		HER17_RS13385	0.48	+0.9
2,969,225	-		HER17_RS13385	0.48	-0.6
2,969,405	+		HER17_RS13385	0.88	-0.1
2,969,416	+				+0.1
2,969,416	+				-1.6
2,969,416	+				+0.5
2,969,416	+				-0.1
2,969,416	+				+0.6
2,969,416	+				-0.3
2,969,416	+				+0.3
2,969,417	-				+0.6
2,969,417	-				+1.3
2,969,635	+		HER17_RS13390	0.70	-0.3
2,969,702	+				+0.7
2,969,702	+				-0.5
2,969,702	+				+1.5
2,969,702	+				+0.0
2,969,808	+		HER17_RS13395	0.21	-0.3
2,969,808	+		HER17_RS13395	0.21	+1.3
2,969,808	+		HER17_RS13395	0.21	-0.2
2,969,808	+		HER17_RS13395	0.21	+0.1
2,969,808	+		HER17_RS13395	0.21	-0.9
2,969,809	-		HER17_RS13395	0.21	-0.0
2,969,809	-		HER17_RS13395	0.21	-0.1
2,969,809	-		HER17_RS13395	0.21	-0.9
2,969,809	-		HER17_RS13395	0.21	+0.3
2,970,055	+		HER17_RS13395	0.71	+0.4
2,970,056	-		HER17_RS13395	0.71	+0.5
2,970,056	-		HER17_RS13395	0.71	+0.7
2,970,140	+		HER17_RS13395	0.88	+0.3
2,970,187	+				+0.3
2,970,187	+				-0.1
2,970,188	-				-0.0
2,970,188	-				+1.2
2,970,199	+				+0.0
2,970,199	+				-0.0
2,970,199	+				+0.1
2,970,199	+				-1.2
2,970,200	-				+0.8
2,970,200	-				+0.8
2,970,213	+				+0.5
2,970,214	-				+0.4
2,970,398	-		HER17_RS13400	0.35	+0.2
2,970,494	-		HER17_RS13400	0.53	+0.0
2,970,573	+		HER17_RS13400	0.68	-0.2
2,970,574	-		HER17_RS13400	0.69	+0.3
2,970,574	-		HER17_RS13400	0.69	-0.2
2,970,749	+				+0.9
2,971,006	+		HER17_RS13405	0.24	-1.9
2,971,013	+		HER17_RS13405	0.24	+1.9
2,971,013	+		HER17_RS13405	0.24	+0.0
2,971,014	-		HER17_RS13405	0.25	-0.1
2,971,111	-		HER17_RS13405	0.34	-0.1
2,971,197	+		HER17_RS13405	0.43	-0.8
2,971,198	-		HER17_RS13405	0.43	-0.2
2,971,198	-		HER17_RS13405	0.43	-0.3
2,971,198	-		HER17_RS13405	0.43	-1.0
2,971,198	-		HER17_RS13405	0.43	+0.2
2,971,453	+		HER17_RS13405	0.69	-0.2
2,971,575	+		HER17_RS13405	0.81	+0.4
2,971,640	+		HER17_RS13405	0.88	+0.1
2,971,641	-		HER17_RS13405	0.88	+0.6