Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS13330

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,954,752	+		HER17_RS13325	0.55	+0.3
2,954,753	-		HER17_RS13325	0.55	+0.2
2,954,756	-		HER17_RS13325	0.55	+0.4
2,954,914	+		HER17_RS13325	0.66	+0.6
2,954,915	-		HER17_RS13325	0.66	+0.4
2,954,915	-		HER17_RS13325	0.66	+1.0
2,955,017	+		HER17_RS13325	0.73	+0.6
2,955,093	+		HER17_RS13325	0.79	+0.0
2,955,094	-		HER17_RS13325	0.79	+0.2
2,955,101	-		HER17_RS13325	0.79	+0.2
2,955,102	+		HER17_RS13325	0.79	+0.4
2,955,103	-		HER17_RS13325	0.79	-0.8
2,955,103	-		HER17_RS13325	0.79	-0.1
2,955,221	+		HER17_RS13325	0.87	+0.8
2,955,222	-		HER17_RS13325	0.88	-0.1
2,955,222	-		HER17_RS13325	0.88	+0.5
2,955,224	+		HER17_RS13325	0.88	+0.0
2,955,236	-		HER17_RS13325	0.89	+0.0
2,955,256	+		HER17_RS13325	0.90	+0.7
2,955,401	-				-0.5
2,955,401	-				-0.7
2,955,446	+				-1.0
2,955,464	+				+0.1
2,955,503	-				-0.5
2,955,560	+				+0.0
2,955,561	-				+0.0
2,955,615	+				+0.5
2,955,616	-				+0.6
2,955,619	+				-0.3
2,955,620	-				-0.7
2,955,620	-				-0.7
2,955,620	-				+0.1
2,955,620	-				+0.5
2,955,620	-				+0.5
2,955,722	+				-0.7
2,955,722	+				-0.7
2,955,722	+				+0.7
2,955,742	-				+0.0
2,955,766	-				-0.3
2,955,996	+		HER17_RS13330	0.37	-0.1
2,955,997	-		HER17_RS13330	0.37	+0.1
2,956,069	+		HER17_RS13330	0.46	+0.6
2,956,069	+		HER17_RS13330	0.46	+0.2
2,956,069	+		HER17_RS13330	0.46	-1.0
2,956,070	-		HER17_RS13330	0.46	-0.2
2,956,100	+		HER17_RS13330	0.50	-0.6
2,956,100	+		HER17_RS13330	0.50	-0.2
2,956,100	+		HER17_RS13330	0.50	+0.5
2,956,101	-		HER17_RS13330	0.50	-0.6
2,956,222	+		HER17_RS13330	0.65	+0.9
2,956,222	+		HER17_RS13330	0.65	-0.2
2,956,222	+		HER17_RS13330	0.65	+0.4
2,956,223	-		HER17_RS13330	0.65	+0.6
2,956,223	-		HER17_RS13330	0.65	-0.4
2,956,225	+		HER17_RS13330	0.65	+1.0
2,956,252	+		HER17_RS13330	0.68	-0.4
2,956,253	-		HER17_RS13330	0.69	-0.0
2,956,254	+		HER17_RS13330	0.69	-0.2
2,956,255	-		HER17_RS13330	0.69	+0.4
2,956,270	-		HER17_RS13330	0.71	+0.9
2,956,289	+		HER17_RS13330	0.73	+0.4
2,956,383	+		HER17_RS13330	0.85	+0.5
2,956,403	-		HER17_RS13330	0.87	-0.4
2,956,448	+				-0.5
2,956,470	-				+0.0
2,956,595	+		HER17_RS13335	0.12	+0.5
2,956,665	-		HER17_RS13335	0.20	+0.4
2,956,668	+		HER17_RS13335	0.20	-0.9
2,956,669	-		HER17_RS13335	0.20	-0.3
2,956,801	+		HER17_RS13335	0.36	+0.1
2,956,911	+		HER17_RS13335	0.49	+0.2
2,957,023	+		HER17_RS13335	0.62	-0.2
2,957,024	-		HER17_RS13335	0.62	+0.2
2,957,109	-		HER17_RS13335	0.72	-0.2
2,957,127	-		HER17_RS13335	0.74	-0.5
2,957,343	+				+0.4
2,957,344	-				+0.7
2,957,382	+				-0.6
2,957,382	+				+0.2
2,957,383	-				-0.7
2,957,386	+				-1.3
2,957,387	-				-0.0
2,957,387	-				-1.4
2,957,387	-				-0.1
2,957,390	+				+0.5
2,957,391	-				-0.1
2,957,445	+				-0.5
2,957,445	+				-0.5