Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS11580

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,573,707	-		HER17_RS11575	0.79	-0.2
2,573,729	+		HER17_RS11575	0.80	+0.5
2,573,729	+		HER17_RS11575	0.80	+0.4
2,573,729	+		HER17_RS11575	0.80	-1.1
2,573,730	-		HER17_RS11575	0.80	+0.8
2,573,730	-		HER17_RS11575	0.80	+0.4
2,573,810	+		HER17_RS11575	0.83	-1.1
2,573,810	+		HER17_RS11575	0.83	-1.6
2,573,815	-		HER17_RS11575	0.84	+0.2
2,573,822	+		HER17_RS11575	0.84	-1.9
2,573,823	-		HER17_RS11575	0.84	+1.1
2,573,842	+		HER17_RS11575	0.85	-0.1
2,573,843	-		HER17_RS11575	0.85	-0.1
2,573,904	+		HER17_RS11575	0.88	+0.4
2,573,930	+		HER17_RS11575	0.89	+0.1
2,573,931	-		HER17_RS11575	0.89	+0.3
2,574,051	-				-0.8
2,574,090	+				-0.4
2,574,093	+				+0.1
2,574,093	+				-0.9
2,574,094	-				-0.0
2,574,101	+				-0.2
2,574,191	-				+0.0
2,574,239	+				-0.3
2,574,251	+				-0.1
2,574,311	+				+0.0
2,574,311	+				+0.3
2,574,312	-				+0.3
2,574,325	-				+0.4
2,574,351	+				+0.8
2,574,371	-				+0.7
2,574,373	+				-0.4
2,574,373	+				-0.3
2,574,396	+				-0.1
2,574,396	+				-0.1
2,574,397	-				-0.6
2,574,397	-				+0.4
2,574,404	+				+1.9
2,574,405	-				+1.8
2,574,484	+				+0.3
2,574,486	+				+0.4
2,574,487	-				-0.8
2,574,519	+				-2.1
2,574,541	+				+0.0
2,574,542	-				+0.0
2,574,542	-				+0.3
2,574,544	-				-0.8
2,574,637	+		HER17_RS11580	0.29	+0.1
2,574,638	-		HER17_RS11580	0.30	+0.4
2,574,649	-		HER17_RS11580	0.34	-0.4
2,574,680	+		HER17_RS11580	0.46	-0.0
2,574,752	+		HER17_RS11580	0.74	+0.7
2,574,772	-		HER17_RS11580	0.82	-0.1
2,574,811	-				+0.4
2,574,818	+				+0.2
2,574,818	+				+0.0
2,574,818	+				-0.3
2,574,818	+				+0.4
2,574,818	+				+0.2
2,574,818	+				-1.6
2,574,818	+				+1.1
2,574,818	+				+0.3
2,574,818	+				+0.4
2,574,818	+				-0.6
2,574,818	+				-0.0
2,574,819	-				-0.1
2,574,819	-				+0.9
2,574,819	-				-0.0
2,574,819	-				+1.5
2,574,819	-				+0.2
2,574,819	-				-1.5
2,574,819	-				-0.3
2,574,819	-				+0.4
2,574,819	-				-0.3
2,574,819	-				+1.2
2,574,846	+				+1.2
2,574,866	+				-0.5
2,574,875	+				-0.6
2,574,898	+				-0.7
2,574,913	+				-0.2
2,574,914	-				+0.5
2,574,974	+				+0.0
2,574,982	+				+0.3
2,574,986	-				+1.6
2,574,998	+				-0.7
2,574,999	-				+1.0
2,574,999	-				-0.1
2,575,003	-				-0.1
2,575,034	+				-1.1
2,575,034	+				-0.1
2,575,034	+				-1.4
2,575,034	+				-1.0
2,575,035	-				-0.1
2,575,035	-				-0.7
2,575,046	-				+0.7
2,575,109	+				+1.1
2,575,109	+				+0.6
2,575,109	+				+0.2
2,575,128	+				+0.5
2,575,128	+				-0.8
2,575,128	+				+1.2
2,575,128	+				-1.6
2,575,128	+				+0.2
2,575,128	+				+0.4
2,575,129	-				+0.4
2,575,129	-				-0.9
2,575,129	-				-0.2
2,575,129	-				+0.9
2,575,129	-				-0.0
2,575,141	+				-0.3
2,575,141	+				-0.3
2,575,141	+				-0.0
2,575,142	-				+0.4
2,575,142	-				+0.1
2,575,142	-				+0.2
2,575,142	-				-0.2
2,575,142	-				-0.1
2,575,142	-				-0.8
2,575,142	-				-0.4
2,575,170	+				+0.0
2,575,171	-				-2.4