Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS10915

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,436,859	-		HER17_RS10910	0.48	+0.1
2,437,048	+		HER17_RS10910	0.69	+0.8
2,437,048	+		HER17_RS10910	0.69	+0.3
2,437,049	-		HER17_RS10910	0.69	-0.5
2,437,252	+				-0.3
2,437,252	+				-0.1
2,437,253	-				-0.5
2,437,269	+				-2.2
2,437,357	-				-0.5
2,437,359	+				+1.1
2,437,360	-				-0.0
2,437,360	-				-0.2
2,437,373	+				+0.8
2,437,374	-				-0.7
2,437,399	-				+0.8
2,437,399	-				+0.4
2,437,409	+				+0.4
2,437,449	-				-0.4
2,437,475	+				-2.2
2,437,476	-				-0.1
2,437,484	+				-1.3
2,437,485	-				+0.5
2,437,485	-				-0.3
2,437,505	-				+1.5
2,437,567	-				-1.3
2,437,599	-				+0.4
2,437,619	-				+0.6
2,437,650	+				-0.8
2,437,651	-				-1.8
2,437,659	-				+1.1
2,437,661	+				+0.3
2,437,661	+				+0.2
2,437,662	-				-1.2
2,437,662	-				-0.6
2,437,779	-				-0.3
2,437,830	-		HER17_RS10915	0.10	-0.2
2,437,834	-		HER17_RS10915	0.11	+0.5
2,437,868	+		HER17_RS10915	0.13	+0.7
2,438,045	+		HER17_RS10915	0.24	-0.3
2,438,191	+		HER17_RS10915	0.34	-0.4
2,438,259	+		HER17_RS10915	0.38	+0.3
2,438,260	-		HER17_RS10915	0.38	+0.1
2,438,524	-		HER17_RS10915	0.55	+0.0
2,438,540	-		HER17_RS10915	0.56	+0.2
2,438,541	+		HER17_RS10915	0.56	-0.3
2,438,541	+		HER17_RS10915	0.56	+0.1
2,438,542	-		HER17_RS10915	0.56	+0.1
2,438,791	-		HER17_RS10915	0.72	+0.7
2,438,812	+		HER17_RS10915	0.73	+0.1
2,438,812	+		HER17_RS10915	0.73	-0.0
2,438,897	+		HER17_RS10915	0.79	+0.1
2,438,898	-		HER17_RS10915	0.79	+0.2
2,439,029	-		HER17_RS10915	0.87	+0.6
2,439,079	+				+0.5
2,439,080	-				+0.1
2,439,080	-				+0.3
2,439,135	+				-0.3
2,439,169	-				-0.2
2,439,252	-				-1.0
2,439,255	-				-1.6
2,439,270	+				+1.0
2,439,271	-				+1.1
2,439,358	+				-1.1
2,439,388	+				-0.5
2,439,425	+		HER17_RS21970	0.12	+0.1
2,439,425	+		HER17_RS21970	0.12	-0.5
2,439,426	-		HER17_RS21970	0.12	+0.5
2,439,426	-		HER17_RS21970	0.12	-0.1
2,439,426	-		HER17_RS21970	0.12	+0.5
2,439,426	-		HER17_RS21970	0.12	+0.4
2,439,595	+		HER17_RS21970	0.22	-0.3
2,439,835	+		HER17_RS21970	0.37	+0.5
2,439,850	+		HER17_RS21970	0.37	-0.2
2,439,850	+		HER17_RS21970	0.37	-1.8
2,439,851	-		HER17_RS21970	0.38	-0.0
2,439,900	+		HER17_RS21970	0.40	+0.3
2,439,901	-		HER17_RS21970	0.41	+0.3
2,440,104	-		HER17_RS21970	0.53	+0.3
2,440,107	+		HER17_RS21970	0.53	+0.1
2,440,107	+		HER17_RS21970	0.53	-0.1
2,440,108	-		HER17_RS21970	0.53	+1.2