Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS10295

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,293,572	-				-0.3
2,293,584	+				+0.1
2,293,584	+				-1.3
2,293,584	+				+0.0
2,293,585	-				+0.6
2,293,615	-				+0.7
2,293,615	-				-0.1
2,293,647	+				+0.8
2,293,647	+				+0.1
2,293,648	-				+0.9
2,293,648	-				-1.6
2,293,669	+				+0.4
2,293,669	+				+0.3
2,293,751	+		HER17_RS10290	0.11	-0.3
2,293,751	+		HER17_RS10290	0.11	+0.0
2,293,751	+		HER17_RS10290	0.11	+1.1
2,293,751	+		HER17_RS10290	0.11	+0.5
2,293,751	+		HER17_RS10290	0.11	-1.3
2,293,751	+		HER17_RS10290	0.11	+0.1
2,293,752	-		HER17_RS10290	0.11	+0.4
2,293,752	-		HER17_RS10290	0.11	-0.4
2,293,752	-		HER17_RS10290	0.11	-0.2
2,293,760	+		HER17_RS10290	0.12	+0.7
2,293,821	-		HER17_RS10290	0.20	-0.7
2,294,058	+		HER17_RS10290	0.48	+0.4
2,294,059	-		HER17_RS10290	0.49	-0.5
2,294,065	+		HER17_RS10290	0.49	+0.2
2,294,135	+		HER17_RS10290	0.58	-1.6
2,294,135	+		HER17_RS10290	0.58	+0.4
2,294,136	-		HER17_RS10290	0.58	+0.1
2,294,162	+		HER17_RS10290	0.61	-1.1
2,294,162	+		HER17_RS10290	0.61	-0.3
2,294,188	-		HER17_RS10290	0.64	-0.2
2,294,188	-		HER17_RS10290	0.64	+0.0
2,294,194	+		HER17_RS10290	0.65	-1.9
2,294,195	-		HER17_RS10290	0.65	-0.4
2,294,195	-		HER17_RS10290	0.65	-0.6
2,294,195	-		HER17_RS10290	0.65	-0.1
2,294,220	+		HER17_RS10290	0.68	-0.5
2,294,221	-		HER17_RS10290	0.68	+0.4
2,294,282	+		HER17_RS10290	0.76	+0.6
2,294,283	-		HER17_RS10290	0.76	+0.6
2,294,319	-		HER17_RS10290	0.80	-0.6
2,294,390	+		HER17_RS10290	0.89	+0.8
2,294,390	+		HER17_RS10290	0.89	+1.6
2,294,470	+				+0.2
2,294,471	-				+1.8
2,294,592	+				+2.4
2,294,592	+				+0.4
2,294,593	-				-0.2
2,294,593	-				-0.4
2,294,593	-				+0.1
2,294,593	-				+0.4
2,294,593	-				+0.6
2,294,604	+		HER17_RS10295	0.10	+0.1
2,294,604	+		HER17_RS10295	0.10	+0.2
2,294,604	+		HER17_RS10295	0.10	+0.6
2,294,607	+		HER17_RS10295	0.11	-0.3
2,294,621	+		HER17_RS10295	0.12	-0.5
2,294,643	+		HER17_RS10295	0.14	+0.0
2,294,695	-		HER17_RS10295	0.20	-0.3
2,294,712	+		HER17_RS10295	0.22	+1.4
2,294,739	+		HER17_RS10295	0.25	-0.9
2,294,740	-		HER17_RS10295	0.25	+0.3
2,294,752	+		HER17_RS10295	0.26	+0.3
2,294,753	-		HER17_RS10295	0.26	+0.6
2,294,911	+		HER17_RS10295	0.43	+0.4
2,294,923	+		HER17_RS10295	0.44	+0.6
2,294,954	+		HER17_RS10295	0.47	+0.1
2,294,954	+		HER17_RS10295	0.47	+0.7
2,295,046	-		HER17_RS10295	0.57	-0.4
2,295,052	-		HER17_RS10295	0.58	-0.5
2,295,112	+		HER17_RS10295	0.64	-0.7
2,295,113	-		HER17_RS10295	0.64	+0.5
2,295,114	+		HER17_RS10295	0.64	+1.4
2,295,114	+		HER17_RS10295	0.64	-0.7
2,295,115	-		HER17_RS10295	0.64	-0.1
2,295,115	-		HER17_RS10295	0.64	+0.3
2,295,115	-		HER17_RS10295	0.64	+0.1
2,295,141	+		HER17_RS10295	0.67	-1.4
2,295,141	+		HER17_RS10295	0.67	+0.9
2,295,329	-		HER17_RS10295	0.87	+0.1
2,295,329	-		HER17_RS10295	0.87	+0.6
2,295,437	+				+1.2
2,295,499	-				-0.0
2,295,505	+				-0.5
2,295,505	+				+0.7
2,295,511	+				-0.7
2,295,512	-				+0.3
2,295,514	+				+0.7
2,295,555	+				+1.0
2,295,622	+		HER17_RS10300	0.17	-0.3
2,295,635	+		HER17_RS10300	0.19	+0.2
2,295,651	-		HER17_RS10300	0.22	+0.1
2,295,651	-		HER17_RS10300	0.22	-1.5
2,295,687	+		HER17_RS10300	0.28	-0.0
2,295,704	+		HER17_RS10300	0.32	+1.4
2,295,704	+		HER17_RS10300	0.32	+0.4
2,295,705	-		HER17_RS10300	0.32	-0.6
2,295,706	+		HER17_RS10300	0.32	-0.6
2,295,707	-		HER17_RS10300	0.32	-2.1
2,295,764	-		HER17_RS10300	0.42	-0.0
2,295,849	+		HER17_RS10300	0.58	+0.5
2,295,873	-		HER17_RS10300	0.62	-0.2
2,295,924	+		HER17_RS10300	0.71	+0.4
2,295,947	+		HER17_RS10300	0.75	-1.4
2,296,041	+				+0.3
2,296,088	+				-1.5
2,296,107	+				+0.8
2,296,108	-				+0.3
2,296,168	+				+0.4
2,296,265	+				-0.2
2,296,265	+				-0.1
2,296,265	+				-0.3
2,296,266	-				-2.1
2,296,270	-		HER17_RS10305	0.10	-0.3
2,296,299	+		HER17_RS10305	0.13	-0.1
2,296,380	-		HER17_RS10305	0.22	+0.8
2,296,406	-		HER17_RS10305	0.24	+0.1
2,296,432	+		HER17_RS10305	0.27	-0.1