Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS09680

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,137,885	+		HER17_RS09675	0.32	-1.0
2,137,959	+		HER17_RS09675	0.41	+0.6
2,137,960	-		HER17_RS09675	0.41	-0.2
2,137,960	-		HER17_RS09675	0.41	-0.3
2,137,960	-		HER17_RS09675	0.41	+0.4
2,138,035	+		HER17_RS09675	0.50	-0.8
2,138,035	+		HER17_RS09675	0.50	+0.2
2,138,036	-		HER17_RS09675	0.50	+0.2
2,138,186	+		HER17_RS09675	0.67	+0.9
2,138,187	-		HER17_RS09675	0.67	+0.1
2,138,187	-		HER17_RS09675	0.67	+0.1
2,138,190	+		HER17_RS09675	0.68	-0.8
2,138,191	-		HER17_RS09675	0.68	+0.6
2,138,362	-		HER17_RS09675	0.88	+0.0
2,138,430	-				+0.5
2,138,445	+				-0.2
2,138,446	-				+1.1
2,138,446	-				+0.2
2,138,446	-				-2.0
2,138,471	-				-0.7
2,138,471	-				-0.0
2,138,471	-				-0.4
2,138,471	-				+0.2
2,138,477	+				+1.3
2,138,477	+				+1.3
2,138,478	-				-0.1
2,138,514	-				-0.2
2,138,516	-				-0.1
2,138,516	-				+0.2
2,138,528	+				-0.3
2,138,532	+				-0.0
2,138,532	+				+0.1
2,138,532	+				+0.1
2,138,532	+				-0.7
2,138,532	+				+0.4
2,138,532	+				+0.1
2,138,533	-				+0.7
2,138,533	-				-0.3
2,138,533	-				-0.8
2,138,534	+				-0.6
2,138,534	+				-0.4
2,138,535	-				+0.7
2,138,535	-				+0.3
2,138,535	-				-0.4
2,138,535	-				-0.7
2,138,535	-				-2.5
2,138,540	+				-0.1
2,138,540	+				+0.2
2,138,541	-				-0.0
2,138,582	+				+0.7
2,138,583	-				-0.9
2,138,583	-				+0.4
2,138,583	-				-0.5
2,138,612	-				-0.3
2,138,683	+				-0.5
2,138,683	+				+0.4
2,138,684	-				+0.2
2,138,710	+				+0.1
2,138,742	+		HER17_RS09680	0.13	-1.0
2,138,811	+		HER17_RS09680	0.36	-0.2
2,138,855	+		HER17_RS09680	0.50	-0.3
2,138,856	-		HER17_RS09680	0.50	-1.2
2,138,945	+		HER17_RS09680	0.80	+0.2
2,138,946	-		HER17_RS09680	0.80	+0.6
2,138,947	+		HER17_RS09680	0.81	-0.4
2,138,947	+		HER17_RS09680	0.81	-1.2
2,138,947	+		HER17_RS09680	0.81	-0.0
2,138,948	-		HER17_RS09680	0.81	-0.8
2,138,948	-		HER17_RS09680	0.81	+0.4
2,138,948	-		HER17_RS09680	0.81	+0.2
2,138,976	+				-0.5
2,138,985	+				-0.1
2,138,991	+				-0.2
2,139,008	+				-0.1
2,139,008	+				-0.6
2,139,008	+				+0.1
2,139,008	+				+0.9
2,139,009	-				+0.2
2,139,009	-				+0.4
2,139,009	-				+0.3
2,139,034	+				+0.3
2,139,035	-				+0.2
2,139,035	-				-0.3
2,139,040	+				-0.9
2,139,040	+				-1.2
2,139,041	-				+0.5
2,139,043	-				-0.8
2,139,043	-				-0.4
2,139,060	-				+0.2
2,139,060	-				+0.6
2,139,060	-				+0.3
2,139,084	+				-1.1
2,139,092	+				-0.4
2,139,100	+				+0.4
2,139,147	-				+0.2
2,139,147	-				-0.7
2,139,242	+				+0.1
2,139,242	+				-0.0
2,139,242	+				-0.0
2,139,289	+				-0.2
2,139,289	+				-0.2
2,139,290	-				-0.3
2,139,290	-				+1.3
2,139,326	-				+0.0
2,139,344	+				-1.0
2,139,345	-				+0.9
2,139,355	+				-0.3
2,139,355	+				+0.3
2,139,356	-				+0.1
2,139,472	+		HER17_RS09685	0.15	+0.6
2,139,559	+		HER17_RS09685	0.36	+0.1
2,139,805	+				-0.1
2,139,809	+				+1.1
2,139,809	+				+1.2
2,139,810	-				-0.2
2,139,810	-				-1.5
2,139,813	-				+0.3
2,139,813	-				+0.6
2,139,817	+				-0.4
2,139,817	+				+0.3
2,139,818	-				-0.1
2,139,818	-				-0.3
2,139,856	+				-0.6
2,139,886	+				-0.0
2,139,937	+				-0.2
2,140,000	+				+0.1
2,140,001	-				-0.2
2,140,003	+				+0.9
2,140,003	+				+1.1
2,140,004	-				+0.9