Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS08285

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,824,854	+		HER17_RS08280	0.57	-0.4
1,824,854	+		HER17_RS08280	0.57	-0.8
1,824,854	+		HER17_RS08280	0.57	-0.1
1,824,855	-		HER17_RS08280	0.57	-1.2
1,824,855	-		HER17_RS08280	0.57	-1.7
1,824,964	-		HER17_RS08280	0.63	-0.1
1,825,001	+		HER17_RS08280	0.66	-0.1
1,825,001	+		HER17_RS08280	0.66	+0.1
1,825,001	+		HER17_RS08280	0.66	+0.2
1,825,002	-		HER17_RS08280	0.66	+0.1
1,825,002	-		HER17_RS08280	0.66	-0.5
1,825,030	+		HER17_RS08280	0.67	-1.1
1,825,048	+		HER17_RS08280	0.68	-0.1
1,825,113	+		HER17_RS08280	0.72	-0.5
1,825,113	+		HER17_RS08280	0.72	-0.8
1,825,114	-		HER17_RS08280	0.72	-0.2
1,825,157	-		HER17_RS08280	0.75	+0.1
1,825,197	+		HER17_RS08280	0.77	-0.0
1,825,197	+		HER17_RS08280	0.77	-2.0
1,825,197	+		HER17_RS08280	0.77	-1.5
1,825,307	+		HER17_RS08280	0.83	+0.6
1,825,414	+		HER17_RS08280	0.90	-0.6
1,825,414	+		HER17_RS08280	0.90	+0.2
1,825,414	+		HER17_RS08280	0.90	-0.8
1,825,414	+		HER17_RS08280	0.90	-0.3
1,825,415	-		HER17_RS08280	0.90	-0.3
1,825,415	-		HER17_RS08280	0.90	-0.7
1,825,415	-		HER17_RS08280	0.90	+0.2
1,825,415	-		HER17_RS08280	0.90	-0.7
1,825,416	+		HER17_RS08280	0.90	-0.4
1,825,422	+				-0.1
1,825,422	+				+0.1
1,825,422	+				-0.6
1,825,423	-				-0.4
1,825,456	+				-1.0
1,825,540	+				-0.1
1,825,541	-				-0.3
1,825,541	-				-0.2
1,825,554	+				-0.6
1,825,554	+				-0.6
1,825,555	-				+0.3
1,825,593	+				-1.2
1,825,593	+				-2.2
1,825,593	+				-0.4
1,825,594	-				+0.4
1,825,594	-				-1.6
1,825,594	-				+0.8
1,825,598	+				+0.0
1,825,598	+				+0.1
1,825,622	+				-0.5
1,825,624	+				-0.1
1,825,624	+				-0.2
1,825,628	+				-0.7
1,825,628	+				+0.2
1,825,628	+				-1.6
1,825,629	-				-0.6
1,825,629	-				+1.4
1,825,629	-				-0.3
1,825,695	-				-1.0
1,825,708	+				-0.5
1,825,760	+				-0.4
1,825,792	+				-0.5
1,825,792	+				-0.1
1,825,792	+				+0.6
1,825,798	-				-1.5
1,825,819	+				+0.0
1,825,820	-				-0.8
1,825,829	-				-0.6
1,825,829	-				-0.4
1,825,829	-				+0.4
1,825,835	+				+0.5
1,825,835	+				-0.6
1,825,835	+				-0.2
1,825,836	-				+0.4
1,825,836	-				-0.6
1,825,843	-				-0.8
1,825,853	+				-1.8
1,825,853	+				-0.7
1,825,853	+				-0.4
1,825,853	+				-0.5
1,825,854	-				-0.5
1,825,854	-				-0.6
1,825,854	-				-1.7
1,825,854	-				-0.8
1,825,854	-				-1.3
1,825,870	+				-0.4
1,825,870	+				+0.3
1,825,870	+				-0.8
1,825,870	+				-0.3
1,825,870	+				-0.0
1,825,871	-				+0.2
1,825,871	-				-1.1
1,826,012	+		HER17_RS08285	0.50	-1.2
1,826,050	+		HER17_RS08285	0.62	+0.3
1,826,124	-		HER17_RS08285	0.86	-1.8
1,826,149	+				-0.3
1,826,149	+				-0.5
1,826,149	+				-0.7
1,826,156	+				-0.2
1,826,157	-				-0.8
1,826,196	+				-0.4
1,826,226	+				-0.2
1,826,227	-				+0.4
1,826,281	-				-0.9
1,826,281	-				+0.1
1,826,287	+				-0.6
1,826,287	+				-0.2
1,826,371	-				-0.7
1,826,371	-				-1.0
1,826,371	-				-0.6
1,826,377	-				-0.4
1,826,969	+		HER17_RS08290	0.53	-0.9
1,826,976	+		HER17_RS08290	0.53	-0.1
1,826,976	+		HER17_RS08290	0.53	-1.5
1,826,976	+		HER17_RS08290	0.53	+0.6
1,826,976	+		HER17_RS08290	0.53	-0.6
1,826,976	+		HER17_RS08290	0.53	-0.5
1,826,980	+		HER17_RS08290	0.54	+0.7
1,826,980	+		HER17_RS08290	0.54	+1.2
1,826,980	+		HER17_RS08290	0.54	-1.9
1,826,995	+		HER17_RS08290	0.55	-0.9
1,826,995	+		HER17_RS08290	0.55	-1.8
1,826,995	+		HER17_RS08290	0.55	-0.2
1,827,020	-		HER17_RS08290	0.57	-0.0
1,827,020	-		HER17_RS08290	0.57	+1.4
1,827,027	-		HER17_RS08290	0.58	-1.1
1,827,027	-		HER17_RS08290	0.58	-0.0
1,827,027	-		HER17_RS08290	0.58	+0.1
1,827,027	-		HER17_RS08290	0.58	+0.3