Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS17935

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,042,817	+				-0.6
4,042,818	-				+0.1
4,042,818	-				+0.7
4,042,865	+				+0.3
4,042,865	+				-0.6
4,042,865	+				+0.4
4,042,866	-				+1.0
4,042,866	-				-0.4
4,042,875	+				+0.2
4,042,875	+				+0.9
4,042,875	+				-0.8
4,042,876	-				+0.4
4,042,876	-				+0.7
4,042,879	+				+0.3
4,042,879	+				-1.4
4,042,879	+				-0.4
4,042,879	+				+0.1
4,042,879	+				-0.5
4,042,879	+				+0.2
4,042,880	-				+0.1
4,042,880	-				+1.4
4,042,881	+				-0.3
4,042,881	+				+1.1
4,042,881	+				-1.1
4,042,882	-				-0.4
4,042,887	+				+1.2
4,042,887	+				+0.2
4,042,887	+				-0.7
4,042,888	-				-0.2
4,042,950	+		HER17_RS17935	0.12	-0.4
4,042,992	+		HER17_RS17935	0.18	-0.2
4,042,993	-		HER17_RS17935	0.18	+1.0
4,043,046	-		HER17_RS17935	0.27	-0.2
4,043,091	+		HER17_RS17935	0.33	-0.1
4,043,091	+		HER17_RS17935	0.33	-0.5
4,043,091	+		HER17_RS17935	0.33	+0.5
4,043,091	+		HER17_RS17935	0.33	+0.1
4,043,092	-		HER17_RS17935	0.34	-0.4
4,043,092	-		HER17_RS17935	0.34	+0.6
4,043,092	-		HER17_RS17935	0.34	+0.3
4,043,095	+		HER17_RS17935	0.34	-0.3
4,043,095	+		HER17_RS17935	0.34	-0.1
4,043,106	-		HER17_RS17935	0.36	-0.2
4,043,106	-		HER17_RS17935	0.36	+0.9
4,043,228	-		HER17_RS17935	0.55	+0.2
4,043,228	-		HER17_RS17935	0.55	+0.4
4,043,229	+		HER17_RS17935	0.55	+0.0
4,043,229	+		HER17_RS17935	0.55	+0.7
4,043,229	+		HER17_RS17935	0.55	-0.1
4,043,229	+		HER17_RS17935	0.55	-0.1
4,043,229	+		HER17_RS17935	0.55	-0.3
4,043,229	+		HER17_RS17935	0.55	-0.5
4,043,229	+		HER17_RS17935	0.55	-0.5
4,043,230	-		HER17_RS17935	0.55	+0.1
4,043,230	-		HER17_RS17935	0.55	-0.4
4,043,230	-		HER17_RS17935	0.55	-0.5
4,043,230	-		HER17_RS17935	0.55	+0.2
4,043,230	-		HER17_RS17935	0.55	-0.2
4,043,250	+		HER17_RS17935	0.58	+1.0
4,043,250	+		HER17_RS17935	0.58	+0.1
4,043,250	+		HER17_RS17935	0.58	-0.6
4,043,250	+		HER17_RS17935	0.58	+0.2
4,043,251	-		HER17_RS17935	0.58	+0.4
4,043,251	-		HER17_RS17935	0.58	-1.0
4,043,251	-		HER17_RS17935	0.58	+0.2
4,043,251	-		HER17_RS17935	0.58	-0.6
4,043,287	+		HER17_RS17935	0.64	+0.6
4,043,288	-		HER17_RS17935	0.64	+0.2
4,043,288	-		HER17_RS17935	0.64	-0.8
4,043,288	-		HER17_RS17935	0.64	+0.1
4,043,290	+		HER17_RS17935	0.64	-0.5
4,043,313	+		HER17_RS17935	0.68	-0.9
4,043,313	+		HER17_RS17935	0.68	-1.7
4,043,356	-		HER17_RS17935	0.74	+0.6
4,043,364	+		HER17_RS17935	0.76	-0.3
4,043,364	+		HER17_RS17935	0.76	+0.5
4,043,364	+		HER17_RS17935	0.76	+1.5
4,043,364	+		HER17_RS17935	0.76	-0.1
4,043,365	-		HER17_RS17935	0.76	-0.3
4,043,368	+		HER17_RS17935	0.76	+0.6
4,043,368	+		HER17_RS17935	0.76	+0.6
4,043,369	-		HER17_RS17935	0.76	-0.3
4,043,429	+		HER17_RS17935	0.86	-2.3
4,043,429	+		HER17_RS17935	0.86	-0.8
4,043,429	+		HER17_RS17935	0.86	-0.0
4,043,429	+		HER17_RS17935	0.86	-0.5
4,043,439	-		HER17_RS17935	0.87	+0.2
4,043,462	+				+0.7
4,043,462	+				-1.0
4,043,462	+				-0.7
4,043,462	+				-0.4
4,043,613	+				-0.6
4,043,613	+				+1.1
4,043,613	+				+0.6
4,043,614	-				+0.5
4,043,614	-				+0.5
4,043,637	+				-0.1
4,043,638	-				-0.6
4,043,638	-				+0.2
4,043,648	-				+0.3
4,043,667	-				-0.4
4,043,676	+				+0.8
4,043,714	+				+0.2
4,043,714	+				-0.6
4,043,722	-				+1.0
4,043,755	-				+0.2
4,043,785	-				-0.5
4,043,791	-				+0.3
4,043,818	-				+1.2
4,043,818	-				-1.8
4,043,872	-		HER17_RS17940	0.12	+0.6
4,043,885	+		HER17_RS17940	0.14	-0.2
4,043,905	-		HER17_RS17940	0.17	+0.2
4,043,980	+		HER17_RS17940	0.30	-0.5
4,043,981	-		HER17_RS17940	0.30	+0.4
4,044,070	+		HER17_RS17940	0.44	+0.6
4,044,260	-		HER17_RS17940	0.76	+1.0
4,044,358	+				+0.7
4,044,358	+				+0.1
4,044,406	+				+0.2
4,044,406	+				+0.9
4,044,471	-				-0.3