Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS17775

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,010,476	+		HER17_RS17765	0.76	-0.4
4,010,476	+		HER17_RS17765	0.76	-1.4
4,010,476	+		HER17_RS17765	0.76	-0.6
4,010,477	-		HER17_RS17765	0.76	-1.0
4,010,477	-		HER17_RS17765	0.76	+0.1
4,010,477	-		HER17_RS17765	0.76	+0.4
4,010,477	-		HER17_RS17765	0.76	-0.1
4,010,477	-		HER17_RS17765	0.76	-1.3
4,010,490	+		HER17_RS17765	0.77	-0.1
4,010,491	-		HER17_RS17765	0.77	-1.1
4,010,491	-		HER17_RS17765	0.77	-1.5
4,010,506	+		HER17_RS17765	0.79	+1.1
4,010,547	-		HER17_RS17765	0.83	-0.1
4,010,547	-		HER17_RS17765	0.83	+0.2
4,010,547	-		HER17_RS17765	0.83	-0.2
4,010,547	-		HER17_RS17765	0.83	+0.5
4,010,682	+				-0.1
4,010,683	-				-0.4
4,010,739	+				+0.4
4,010,740	-				-1.1
4,010,790	+				+1.1
4,010,921	-		HER17_RS17770	0.28	-0.3
4,010,921	-		HER17_RS17770	0.28	+0.3
4,010,956	+		HER17_RS17770	0.33	-0.7
4,010,959	-		HER17_RS17770	0.34	+0.1
4,010,963	+		HER17_RS17770	0.34	-0.4
4,010,964	-		HER17_RS17770	0.35	-0.5
4,010,964	-		HER17_RS17770	0.35	+0.3
4,011,062	+		HER17_RS17770	0.49	-1.0
4,011,062	+		HER17_RS17770	0.49	+0.2
4,011,070	+		HER17_RS17770	0.50	+0.1
4,011,070	+		HER17_RS17770	0.50	+1.0
4,011,071	-		HER17_RS17770	0.50	+0.1
4,011,073	+		HER17_RS17770	0.50	+0.3
4,011,074	-		HER17_RS17770	0.51	+1.1
4,011,074	-		HER17_RS17770	0.51	-0.1
4,011,112	-		HER17_RS17770	0.56	+0.0
4,011,112	-		HER17_RS17770	0.56	+0.3
4,011,147	+		HER17_RS17770	0.61	+0.0
4,011,208	+		HER17_RS17770	0.70	-0.9
4,011,208	+		HER17_RS17770	0.70	+0.6
4,011,209	-		HER17_RS17770	0.70	+0.2
4,011,234	+		HER17_RS17770	0.74	+0.2
4,011,235	-		HER17_RS17770	0.74	+0.3
4,011,235	-		HER17_RS17770	0.74	-1.7
4,011,247	+		HER17_RS17770	0.76	-0.7
4,011,248	-		HER17_RS17770	0.76	+0.1
4,011,248	-		HER17_RS17770	0.76	+0.2
4,011,325	-		HER17_RS17770	0.87	-0.2
4,011,427	-				-1.1
4,011,448	+				-0.3
4,011,449	-				-0.2
4,011,449	-				+0.3
4,011,449	-				-0.2
4,011,449	-				+0.3
4,011,476	+				+0.9
4,011,477	-				+0.5
4,011,479	+				-1.1
4,011,479	+				+0.6
4,011,479	+				-0.4
4,011,479	+				-0.3
4,011,479	+				-0.0
4,011,597	-		HER17_RS17775	0.19	+0.0
4,011,607	-		HER17_RS17775	0.20	-0.5
4,011,607	-		HER17_RS17775	0.20	+0.3
4,011,897	-		HER17_RS17775	0.61	-0.1
4,011,897	-		HER17_RS17775	0.61	+0.6
4,012,005	+		HER17_RS17775	0.76	-0.7
4,012,006	-		HER17_RS17775	0.76	-0.5
4,012,016	+		HER17_RS17775	0.77	+0.1
4,012,083	+		HER17_RS17775	0.86	+0.7
4,012,083	+		HER17_RS17775	0.86	+0.8
4,012,083	+		HER17_RS17775	0.86	+0.1
4,012,083	+		HER17_RS17775	0.86	-0.7
4,012,121	-				+0.5
4,012,124	+				-0.1
4,012,124	+				+0.6
4,012,124	+				+1.1
4,012,125	-				+0.1
4,012,125	-				+0.2
4,012,125	-				-1.2
4,012,125	-				+0.1
4,012,125	-				+1.1
4,012,125	-				-0.7
4,012,168	+				+0.3
4,012,168	+				+0.0
4,012,174	+				-0.0
4,012,286	+				-1.8
4,012,286	+				-1.3
4,012,286	+				+0.6
4,012,286	+				-0.7
4,012,286	+				-0.7
4,012,286	+				-0.6
4,012,287	-				-0.1
4,012,287	-				-0.4
4,012,287	-				-0.5
4,012,287	-				+0.1
4,012,287	-				+0.7
4,012,287	-				-0.3
4,012,287	-				+0.1
4,012,290	+				+0.1
4,012,291	-				+0.4
4,012,291	-				+0.5
4,012,291	-				+0.0
4,012,291	-				-1.1
4,012,311	+				+0.1
4,012,311	+				-0.3
4,012,350	+				+1.0
4,012,356	+				+0.7
4,012,356	+				-0.1
4,012,357	-				+0.6
4,012,362	+				-0.3
4,012,362	+				+0.1
4,012,363	-				-0.1
4,012,363	-				+0.7
4,012,372	+				+0.4
4,012,433	-				-0.2
4,012,480	+				+0.8
4,012,480	+				-0.2
4,012,480	+				-0.1
4,012,481	-				-0.5
4,012,535	+		HER17_RS17780	0.14	-0.5
4,012,535	+		HER17_RS17780	0.14	-0.6
4,012,535	+		HER17_RS17780	0.14	+0.4
4,012,536	-		HER17_RS17780	0.14	-0.7
4,012,536	-		HER17_RS17780	0.14	-0.4
4,012,536	-		HER17_RS17780	0.14	-0.3
4,012,557	+		HER17_RS17780	0.15	-0.8
4,012,557	+		HER17_RS17780	0.15	-0.9
4,012,558	-		HER17_RS17780	0.15	+0.0
4,012,558	-		HER17_RS17780	0.15	+0.1
4,012,558	-		HER17_RS17780	0.15	+0.4
4,012,558	-		HER17_RS17780	0.15	-0.4
4,012,587	+		HER17_RS17780	0.17	+0.9
4,012,659	+		HER17_RS17780	0.22	+0.2
4,012,714	+		HER17_RS17780	0.26	-0.3
4,012,714	+		HER17_RS17780	0.26	-0.5
4,012,714	+		HER17_RS17780	0.26	-0.2
4,012,714	+		HER17_RS17780	0.26	-0.8
4,012,715	-		HER17_RS17780	0.26	+0.0
4,012,715	-		HER17_RS17780	0.26	-0.4
4,012,715	-		HER17_RS17780	0.26	-0.0
4,012,715	-		HER17_RS17780	0.26	-0.5
4,012,715	-		HER17_RS17780	0.26	+0.3
4,012,734	+		HER17_RS17780	0.27	-0.5
4,012,913	-		HER17_RS17780	0.39	+0.3
4,012,968	+		HER17_RS17780	0.43	-0.2
4,012,969	-		HER17_RS17780	0.43	-1.6
4,012,969	-		HER17_RS17780	0.43	-0.2
4,012,977	+		HER17_RS17780	0.43	-1.2
4,012,977	+		HER17_RS17780	0.43	+0.6
4,012,977	+		HER17_RS17780	0.43	+1.0
4,012,977	+		HER17_RS17780	0.43	-2.0
4,012,978	-		HER17_RS17780	0.43	-0.0
4,013,166	+		HER17_RS17780	0.56	-0.1