Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS16090

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,615,766	+		HER17_RS16085	0.46	+0.1
3,615,770	-		HER17_RS16085	0.47	+0.4
3,615,869	+		HER17_RS16085	0.54	+0.1
3,615,902	+		HER17_RS16085	0.57	-0.0
3,615,903	-		HER17_RS16085	0.57	+0.1
3,615,983	+		HER17_RS16085	0.63	+1.6
3,616,116	-		HER17_RS16085	0.74	+0.4
3,616,116	-		HER17_RS16085	0.74	-0.5
3,616,116	-		HER17_RS16085	0.74	+0.1
3,616,116	-		HER17_RS16085	0.74	+0.3
3,616,138	+		HER17_RS16085	0.75	-0.2
3,616,138	+		HER17_RS16085	0.75	+0.5
3,616,138	+		HER17_RS16085	0.75	+0.2
3,616,138	+		HER17_RS16085	0.75	+0.2
3,616,139	-		HER17_RS16085	0.76	-0.8
3,616,139	-		HER17_RS16085	0.76	+0.2
3,616,139	-		HER17_RS16085	0.76	-1.1
3,616,139	-		HER17_RS16085	0.76	+0.9
3,616,139	-		HER17_RS16085	0.76	+0.6
3,616,150	+		HER17_RS16085	0.76	+0.0
3,616,150	+		HER17_RS16085	0.76	+0.2
3,616,174	+		HER17_RS16085	0.78	-0.7
3,616,174	+		HER17_RS16085	0.78	+0.4
3,616,174	+		HER17_RS16085	0.78	-0.6
3,616,178	+		HER17_RS16085	0.79	-0.0
3,616,178	+		HER17_RS16085	0.79	+0.1
3,616,179	-		HER17_RS16085	0.79	-0.0
3,616,204	+		HER17_RS16085	0.81	-0.8
3,616,204	+		HER17_RS16085	0.81	-1.1
3,616,204	+		HER17_RS16085	0.81	+0.2
3,616,204	+		HER17_RS16085	0.81	+0.2
3,616,205	-		HER17_RS16085	0.81	-0.2
3,616,205	-		HER17_RS16085	0.81	+0.3
3,616,205	-		HER17_RS16085	0.81	+0.9
3,616,212	+		HER17_RS16085	0.81	-0.1
3,616,324	+				+0.4
3,616,324	+				-0.1
3,616,350	-				+0.4
3,616,370	-				+0.6
3,616,443	-				+0.2
3,616,451	+				-0.1
3,616,455	+				-0.9
3,616,455	+				+0.1
3,616,456	-				-0.3
3,616,456	-				+0.6
3,616,475	-				-2.0
3,616,480	-				+0.0
3,616,499	+				-1.0
3,616,499	+				-1.4
3,616,540	+				-0.6
3,616,541	-				-0.8
3,616,561	+				+0.2
3,616,561	+				+0.8
3,616,561	+				+0.1
3,616,562	-				+0.1
3,616,566	-				-0.5
3,616,566	-				-0.6
3,616,659	+				-2.0
3,616,659	+				+0.2
3,616,659	+				+0.4
3,616,660	-				-0.5
3,616,664	-				+1.3
3,616,703	-				+0.6
3,616,714	+				-0.8
3,616,895	-		HER17_RS16090	0.64	+0.1
3,616,895	-		HER17_RS16090	0.64	-1.5
3,616,895	-		HER17_RS16090	0.64	+0.7
3,616,895	-		HER17_RS16090	0.64	+0.5
3,616,895	-		HER17_RS16090	0.64	-0.6
3,616,895	-		HER17_RS16090	0.64	+1.4
3,616,895	-		HER17_RS16090	0.64	-0.8
3,616,979	-				-0.1
3,616,986	+				+0.8
3,617,070	+				+1.5
3,617,111	+				-0.5
3,617,111	+				+0.6
3,617,112	-				+0.2
3,617,139	+				+0.4
3,617,140	-				+0.4
3,617,140	-				+0.4
3,617,255	+		HER17_RS16095	0.22	+0.2
3,617,255	+		HER17_RS16095	0.22	+0.8
3,617,255	+		HER17_RS16095	0.22	+0.2
3,617,256	-		HER17_RS16095	0.23	-0.8
3,617,256	-		HER17_RS16095	0.23	+0.1
3,617,365	-		HER17_RS16095	0.43	+0.6
3,617,389	+		HER17_RS16095	0.48	-0.9
3,617,389	+		HER17_RS16095	0.48	+0.3
3,617,390	-		HER17_RS16095	0.48	+0.2
3,617,419	+		HER17_RS16095	0.54	+0.7
3,617,420	-		HER17_RS16095	0.54	+0.3
3,617,533	+		HER17_RS16095	0.76	-1.4
3,617,533	+		HER17_RS16095	0.76	+0.5
3,617,534	-		HER17_RS16095	0.76	-0.3
3,617,551	+		HER17_RS16095	0.79	-0.0
3,617,552	-		HER17_RS16095	0.79	+0.5
3,617,577	+		HER17_RS16095	0.84	-0.6
3,617,578	-		HER17_RS16095	0.84	+0.7
3,617,641	+				-0.1
3,617,642	-				+0.8
3,617,661	+				+0.1
3,617,661	+				-0.2
3,617,661	+				-0.7
3,617,661	+				+0.5
3,617,661	+				-0.0
3,617,661	+				+0.3
3,617,661	+				-0.7
3,617,661	+				+0.0
3,617,661	+				+0.0
3,617,662	-				+0.2
3,617,662	-				+0.3
3,617,662	-				-0.2
3,617,662	-				-1.0
3,617,662	-				+0.3
3,617,662	-				+0.0
3,617,669	+				+0.6
3,617,670	-				+0.5
3,617,682	+				+0.4
3,617,682	+				+0.3
3,617,700	+				+0.2
3,617,700	+				+0.5
3,617,720	+				-0.0
3,617,720	+				-1.4
3,617,720	+				+0.1
3,617,720	+				+0.3
3,617,720	+				+0.4
3,617,721	-				+0.1
3,617,721	-				+0.5
3,617,721	-				-0.2
3,617,721	-				+0.0
3,617,742	+				-0.7
3,617,742	+				-0.6
3,617,743	-				-0.5
3,617,760	+				+0.8
3,617,761	-				-0.4
3,617,774	+				+0.4
3,617,775	-				+0.0
3,617,775	-				+0.6
3,617,806	+				+0.7
3,617,806	+				+1.0
3,617,888	-				+0.1
3,617,916	-				-0.6
3,617,923	+				+0.0
3,617,924	-				-0.3
3,617,924	-				-0.1
3,617,924	-				-0.7
3,617,946	-				-0.1
3,617,946	-				+0.4
3,617,946	-				-1.1
3,617,957	+				+0.0