Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS14715

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,311,550	+		HER17_RS14710	0.33	+0.4
3,311,551	-		HER17_RS14710	0.33	+0.9
3,311,652	+		HER17_RS14710	0.41	-0.1
3,311,653	-		HER17_RS14710	0.41	-0.8
3,311,653	-		HER17_RS14710	0.41	+0.2
3,311,659	+		HER17_RS14710	0.42	+0.4
3,311,660	-		HER17_RS14710	0.42	-0.6
3,311,695	+		HER17_RS14710	0.45	-0.2
3,311,696	-		HER17_RS14710	0.45	+0.3
3,311,715	+		HER17_RS14710	0.46	+1.1
3,311,836	-		HER17_RS14710	0.56	-0.6
3,311,836	-		HER17_RS14710	0.56	+0.3
3,311,855	-		HER17_RS14710	0.58	-1.3
3,311,861	-		HER17_RS14710	0.58	-0.7
3,311,861	-		HER17_RS14710	0.58	+0.4
3,311,986	+		HER17_RS14710	0.68	-2.3
3,311,987	-		HER17_RS14710	0.68	-0.3
3,311,987	-		HER17_RS14710	0.68	-0.2
3,312,073	+		HER17_RS14710	0.75	-0.4
3,312,073	+		HER17_RS14710	0.75	-0.4
3,312,073	+		HER17_RS14710	0.75	-0.2
3,312,073	+		HER17_RS14710	0.75	-0.1
3,312,073	+		HER17_RS14710	0.75	+0.3
3,312,074	-		HER17_RS14710	0.75	+1.4
3,312,074	-		HER17_RS14710	0.75	-0.0
3,312,074	-		HER17_RS14710	0.75	+0.4
3,312,075	+		HER17_RS14710	0.75	+0.4
3,312,097	-		HER17_RS14710	0.77	-0.5
3,312,104	-		HER17_RS14710	0.78	+0.9
3,312,199	+		HER17_RS14710	0.85	-0.6
3,312,199	+		HER17_RS14710	0.85	+0.2
3,312,199	+		HER17_RS14710	0.85	-0.3
3,312,200	-		HER17_RS14710	0.85	+0.1
3,312,244	+		HER17_RS14710	0.89	-0.4
3,312,245	-		HER17_RS14710	0.89	-0.4
3,312,247	-		HER17_RS14710	0.89	-0.5
3,312,267	+				+0.2
3,312,267	+				-0.6
3,312,273	-				-0.4
3,312,361	+				-0.8
3,312,397	+				+0.1
3,312,397	+				+0.2
3,312,398	-				+0.0
3,312,401	+				+0.4
3,312,459	+				-0.4
3,312,459	+				-1.0
3,312,459	+				+1.8
3,312,459	+				-0.2
3,312,459	+				+0.2
3,312,459	+				-0.1
3,312,459	+				+0.0
3,312,459	+				+0.4
3,312,460	-				-0.4
3,312,460	-				+0.5
3,312,460	-				+0.2
3,312,460	-				-0.2
3,312,460	-				-0.7
3,312,463	+				+0.6
3,312,463	+				-1.1
3,312,463	+				+1.7
3,312,464	-				-0.2
3,312,464	-				+0.5
3,312,464	-				-0.1
3,312,464	-				-0.3
3,312,513	+				-2.0
3,312,513	+				+0.2
3,312,513	+				+0.2
3,312,514	-				-0.8
3,312,557	+				+0.9
3,312,557	+				-0.6
3,312,557	+				-0.1
3,312,558	-				-0.5
3,312,559	+				+0.6
3,312,560	-				-0.4
3,312,618	+				-0.3
3,312,625	+		HER17_RS14715	0.10	-0.3
3,312,634	-		HER17_RS14715	0.11	-0.7
3,312,695	+		HER17_RS14715	0.17	-0.2
3,312,696	-		HER17_RS14715	0.17	+0.4
3,312,696	-		HER17_RS14715	0.17	-0.3
3,312,696	-		HER17_RS14715	0.17	+1.0
3,312,717	+		HER17_RS14715	0.19	+0.3
3,312,717	+		HER17_RS14715	0.19	+0.1
3,312,718	-		HER17_RS14715	0.19	+0.2
3,312,794	+		HER17_RS14715	0.26	-0.2
3,312,906	+		HER17_RS14715	0.36	-0.7
3,312,912	+		HER17_RS14715	0.37	-0.6
3,312,912	+		HER17_RS14715	0.37	-0.2
3,312,913	-		HER17_RS14715	0.37	-0.1
3,312,926	-		HER17_RS14715	0.38	-0.3
3,313,004	-		HER17_RS14715	0.45	+0.9
3,313,156	+		HER17_RS14715	0.60	+0.0
3,313,157	-		HER17_RS14715	0.60	+0.7
3,313,157	-		HER17_RS14715	0.60	-0.6
3,313,164	-		HER17_RS14715	0.60	-0.7
3,313,171	+		HER17_RS14715	0.61	-2.3
3,313,172	-		HER17_RS14715	0.61	-0.0
3,313,177	+		HER17_RS14715	0.62	-0.4
3,313,177	+		HER17_RS14715	0.62	+0.2
3,313,177	+		HER17_RS14715	0.62	-0.1
3,313,178	-		HER17_RS14715	0.62	-0.8
3,313,199	+		HER17_RS14715	0.64	+0.7
3,313,199	+		HER17_RS14715	0.64	+0.3
3,313,221	-		HER17_RS14715	0.66	+0.5
3,313,221	-		HER17_RS14715	0.66	+0.8
3,313,486	+				+0.6
3,313,486	+				-1.7
3,313,486	+				+1.0
3,313,486	+				-0.7
3,313,486	+				-0.4
3,313,487	-				+0.3
3,313,545	+				-0.4
3,313,548	+				+0.9
3,313,632	+				-0.1
3,313,632	+				-0.9
3,313,633	-				+0.5
3,313,633	-				-0.2
3,313,633	-				-0.8
3,313,757	+		HER17_RS14720	0.15	-1.1
3,313,758	-		HER17_RS14720	0.15	-0.4
3,313,788	+		HER17_RS14720	0.18	-0.3
3,313,789	-		HER17_RS14720	0.18	-0.8
3,313,789	-		HER17_RS14720	0.18	-1.0
3,313,833	+		HER17_RS14720	0.22	+0.3
3,313,875	+		HER17_RS14720	0.25	+0.6
3,313,876	-		HER17_RS14720	0.25	-0.5
3,313,876	-		HER17_RS14720	0.25	+0.5
3,313,876	-		HER17_RS14720	0.25	-0.0
3,313,992	+		HER17_RS14720	0.35	+0.7
3,313,993	-		HER17_RS14720	0.35	-0.1
3,314,035	+		HER17_RS14720	0.39	+0.3
3,314,035	+		HER17_RS14720	0.39	-0.1
3,314,069	-		HER17_RS14720	0.42	+0.4
3,314,069	-		HER17_RS14720	0.42	+0.7
3,314,154	+		HER17_RS14720	0.49	+1.3
3,314,154	+		HER17_RS14720	0.49	+0.8
3,314,299	+		HER17_RS14720	0.62	-0.2
3,314,300	-		HER17_RS14720	0.62	-0.0