Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS14285

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,212,689	+		HER17_RS14280	0.73	+2.8
3,212,689	+		HER17_RS14280	0.73	-0.2
3,212,690	-		HER17_RS14280	0.73	+0.7
3,212,700	+		HER17_RS14280	0.73	+0.1
3,212,700	+		HER17_RS14280	0.73	+0.5
3,212,770	-		HER17_RS14280	0.76	-0.1
3,212,975	+		HER17_RS14280	0.82	-0.3
3,212,976	-		HER17_RS14280	0.82	+0.9
3,212,983	+		HER17_RS14280	0.82	+0.1
3,213,238	+				-0.3
3,213,238	+				-0.9
3,213,239	-				+0.6
3,213,239	-				+0.4
3,213,240	+				+0.1
3,213,241	-				-0.8
3,213,274	-				-0.0
3,213,274	-				-0.0
3,213,274	-				-0.2
3,213,344	+				+0.4
3,213,363	+				+0.2
3,213,378	-				+0.6
3,213,477	-				+0.5
3,213,548	+				-0.0
3,213,615	-				+0.9
3,213,619	-				-0.2
3,213,649	+				-0.3
3,213,649	+				-0.3
3,213,674	+				+0.5
3,213,677	+				-0.3
3,213,682	-				-0.9
3,213,746	+				+0.6
3,213,794	-				+0.7
3,213,943	+		HER17_RS14285	0.22	-0.8
3,213,944	-		HER17_RS14285	0.22	+0.4
3,213,948	-		HER17_RS14285	0.22	+0.0
3,213,963	+		HER17_RS14285	0.23	+1.0
3,213,971	+		HER17_RS14285	0.24	-0.9
3,213,985	-		HER17_RS14285	0.25	-0.2
3,213,991	+		HER17_RS14285	0.25	+0.0
3,214,007	+		HER17_RS14285	0.27	+0.0
3,214,007	+		HER17_RS14285	0.27	-0.2
3,214,042	+		HER17_RS14285	0.29	+0.1
3,214,052	+		HER17_RS14285	0.30	-0.6
3,214,053	-		HER17_RS14285	0.30	+1.5
3,214,053	-		HER17_RS14285	0.30	+0.1
3,214,138	+		HER17_RS14285	0.37	-3.0
3,214,139	-		HER17_RS14285	0.37	+0.3
3,214,139	-		HER17_RS14285	0.37	+0.1
3,214,147	+		HER17_RS14285	0.38	-0.2
3,214,150	+		HER17_RS14285	0.38	-0.6
3,214,151	-		HER17_RS14285	0.38	+0.1
3,214,151	-		HER17_RS14285	0.38	-0.7
3,214,185	+		HER17_RS14285	0.41	+0.3
3,214,186	-		HER17_RS14285	0.41	+0.6
3,214,273	-		HER17_RS14285	0.48	+0.2
3,214,352	+		HER17_RS14285	0.54	-0.2
3,214,353	-		HER17_RS14285	0.54	+1.1
3,214,353	-		HER17_RS14285	0.54	+0.9
3,214,376	+		HER17_RS14285	0.56	+0.7
3,214,376	+		HER17_RS14285	0.56	+1.1
3,214,376	+		HER17_RS14285	0.56	-0.7
3,214,376	+		HER17_RS14285	0.56	-0.8
3,214,376	+		HER17_RS14285	0.56	+0.2
3,214,376	+		HER17_RS14285	0.56	-0.0
3,214,376	+		HER17_RS14285	0.56	+0.2
3,214,376	+		HER17_RS14285	0.56	+0.7
3,214,376	+		HER17_RS14285	0.56	+0.3
3,214,377	-		HER17_RS14285	0.56	-0.2
3,214,377	-		HER17_RS14285	0.56	+0.7
3,214,377	-		HER17_RS14285	0.56	+0.6
3,214,377	-		HER17_RS14285	0.56	+0.2
3,214,449	+		HER17_RS14285	0.62	-0.0
3,214,450	-		HER17_RS14285	0.62	+0.4
3,214,484	-		HER17_RS14285	0.64	-0.8
3,214,558	+		HER17_RS14285	0.70	-0.1
3,214,558	+		HER17_RS14285	0.70	+0.4
3,214,565	-		HER17_RS14285	0.71	-0.1
3,214,565	-		HER17_RS14285	0.71	+0.6
3,214,647	+		HER17_RS14285	0.77	-0.9
3,214,647	+		HER17_RS14285	0.77	-0.6
3,214,647	+		HER17_RS14285	0.77	-0.3
3,214,676	+		HER17_RS14285	0.80	+0.3
3,214,676	+		HER17_RS14285	0.80	-1.0
3,214,676	+		HER17_RS14285	0.80	+0.3
3,214,677	-		HER17_RS14285	0.80	+0.3
3,214,677	-		HER17_RS14285	0.80	+0.6
3,214,681	+		HER17_RS14285	0.80	-0.4
3,214,783	+		HER17_RS14285	0.88	-0.3
3,214,783	+		HER17_RS14285	0.88	+0.2
3,214,784	-		HER17_RS14285	0.88	-0.2
3,214,784	-		HER17_RS14285	0.88	+0.6
3,214,784	-		HER17_RS14285	0.88	-0.8
3,214,788	-		HER17_RS14285	0.88	+0.7
3,214,788	-		HER17_RS14285	0.88	+1.6
3,214,788	-		HER17_RS14285	0.88	-0.3
3,214,815	-				-0.5
3,214,815	-				-0.6
3,214,932	-				+0.3
3,215,022	+				-2.0
3,215,022	+				-0.2
3,215,118	+		HER17_RS14290	0.55	+0.1
3,215,309	-				-0.9
3,215,311	+				-0.2
3,215,325	+				-0.4
3,215,325	+				-0.2
3,215,326	-				-0.5
3,215,326	-				-0.0
3,215,326	-				+0.3
3,215,347	+				+0.4
3,215,347	+				-0.0
3,215,356	+				-1.5
3,215,378	-				-0.3
3,215,395	-				+0.4
3,215,429	-				-0.3
3,215,480	-				-0.2
3,215,480	-				-1.2
3,215,483	+				+0.1
3,215,483	+				+0.2
3,215,484	-				-1.3
3,215,484	-				+0.5
3,215,535	-		HER17_RS14295	0.11	-0.3
3,215,608	+		HER17_RS14295	0.18	-0.6
3,215,609	-		HER17_RS14295	0.18	+0.9
3,215,639	+		HER17_RS14295	0.21	-0.0
3,215,639	+		HER17_RS14295	0.21	-0.0
3,215,716	-		HER17_RS14295	0.28	-0.2
3,215,739	+		HER17_RS14295	0.31	-0.8
3,215,739	+		HER17_RS14295	0.31	+1.5
3,215,739	+		HER17_RS14295	0.31	+0.2
3,215,754	-		HER17_RS14295	0.32	-0.6
3,215,754	-		HER17_RS14295	0.32	+1.0
3,215,802	+		HER17_RS14295	0.37	+0.0
3,215,802	+		HER17_RS14295	0.37	+0.8
3,215,802	+		HER17_RS14295	0.37	+0.2
3,215,802	+		HER17_RS14295	0.37	-0.2
3,215,803	-		HER17_RS14295	0.37	+0.2
3,215,803	-		HER17_RS14295	0.37	+0.8
3,215,803	-		HER17_RS14295	0.37	-0.5
3,215,803	-		HER17_RS14295	0.37	+0.2
3,215,803	-		HER17_RS14295	0.37	+0.1
3,215,803	-		HER17_RS14295	0.37	-0.9
3,215,808	-		HER17_RS14295	0.37	-0.4
3,215,823	+		HER17_RS14295	0.39	+1.0
3,215,824	-		HER17_RS14295	0.39	+0.9
3,215,846	+		HER17_RS14295	0.41	+0.1
3,215,846	+		HER17_RS14295	0.41	+0.1
3,215,847	-		HER17_RS14295	0.41	+0.6
3,215,849	-		HER17_RS14295	0.41	+0.4
3,215,880	+		HER17_RS14295	0.44	-0.0
3,215,880	+		HER17_RS14295	0.44	+0.6
3,215,881	-		HER17_RS14295	0.45	+0.1
3,215,900	+		HER17_RS14295	0.46	-0.9