Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS14275

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,208,137	+		HER17_RS14270	0.39	-0.9
3,208,236	-		HER17_RS14270	0.48	-0.3
3,208,314	+		HER17_RS14270	0.55	-0.3
3,208,314	+		HER17_RS14270	0.55	-1.4
3,208,315	-		HER17_RS14270	0.55	+0.5
3,208,315	-		HER17_RS14270	0.55	+0.1
3,208,315	-		HER17_RS14270	0.55	-0.6
3,208,315	-		HER17_RS14270	0.55	+0.1
3,208,315	-		HER17_RS14270	0.55	-1.0
3,208,319	+		HER17_RS14270	0.56	+0.0
3,208,320	-		HER17_RS14270	0.56	+0.2
3,208,320	-		HER17_RS14270	0.56	+0.2
3,208,448	+		HER17_RS14270	0.68	+0.5
3,208,449	-		HER17_RS14270	0.68	+0.5
3,208,449	-		HER17_RS14270	0.68	-0.1
3,208,463	+		HER17_RS14270	0.69	+1.4
3,208,463	+		HER17_RS14270	0.69	+0.7
3,208,464	-		HER17_RS14270	0.69	+0.5
3,208,464	-		HER17_RS14270	0.69	+0.5
3,208,475	+		HER17_RS14270	0.70	+0.4
3,208,476	-		HER17_RS14270	0.71	+0.3
3,208,499	+		HER17_RS14270	0.73	-0.1
3,208,499	+		HER17_RS14270	0.73	-1.2
3,208,503	+		HER17_RS14270	0.73	+0.3
3,208,503	+		HER17_RS14270	0.73	-0.4
3,208,504	-		HER17_RS14270	0.73	+0.1
3,208,504	-		HER17_RS14270	0.73	+0.5
3,208,504	-		HER17_RS14270	0.73	+0.5
3,208,638	+		HER17_RS14270	0.86	-0.6
3,208,638	+		HER17_RS14270	0.86	-0.2
3,208,638	+		HER17_RS14270	0.86	-0.3
3,208,639	-		HER17_RS14270	0.86	+0.5
3,208,639	-		HER17_RS14270	0.86	+0.7
3,208,685	+				-0.9
3,208,685	+				+0.5
3,208,685	+				-0.2
3,208,686	-				+1.5
3,208,686	-				-0.3
3,208,737	+				+0.2
3,208,737	+				+0.5
3,208,738	-				+0.3
3,208,738	-				-0.5
3,208,759	-				+0.1
3,208,759	-				-0.9
3,208,800	+				-0.4
3,208,800	+				-0.1
3,208,801	-				+1.0
3,208,801	-				-0.3
3,208,801	-				+0.2
3,208,843	+				-0.2
3,208,853	+				+0.1
3,208,853	+				+1.4
3,208,888	+				-0.2
3,208,888	+				-0.5
3,208,889	-				+1.5
3,208,889	-				-0.1
3,208,971	+				-0.3
3,208,971	+				-2.6
3,208,971	+				-0.2
3,208,972	-				-0.7
3,208,972	-				-1.6
3,208,986	+				+0.1
3,208,987	-				+0.2
3,208,990	+				+0.3
3,208,990	+				-0.1
3,208,991	-				+0.3
3,209,035	+				-0.5
3,209,036	-				+0.2
3,209,036	-				+0.3
3,209,067	+				-0.2
3,209,067	+				+0.4
3,209,127	-		HER17_RS14275	0.11	-0.1
3,209,157	+		HER17_RS14275	0.13	-1.2
3,209,158	-		HER17_RS14275	0.13	-0.5
3,209,166	-		HER17_RS14275	0.14	-0.3
3,209,267	+		HER17_RS14275	0.24	+0.0
3,209,268	-		HER17_RS14275	0.24	-0.2
3,209,339	+		HER17_RS14275	0.30	+0.9
3,209,340	-		HER17_RS14275	0.30	+0.2
3,209,343	-		HER17_RS14275	0.31	+0.6
3,209,477	+		HER17_RS14275	0.43	-0.6
3,209,485	+		HER17_RS14275	0.44	+0.6
3,209,486	-		HER17_RS14275	0.44	-2.4
3,209,525	-		HER17_RS14275	0.48	-1.6
3,209,862	+		HER17_RS14275	0.79	+0.1
3,209,862	+		HER17_RS14275	0.79	+0.0
3,209,862	+		HER17_RS14275	0.79	-0.9
3,209,862	+		HER17_RS14275	0.79	-0.4
3,209,863	-		HER17_RS14275	0.79	-0.4
3,209,863	-		HER17_RS14275	0.79	-0.6
3,209,863	-		HER17_RS14275	0.79	-0.1
3,209,863	-		HER17_RS14275	0.79	+0.2
3,209,905	+		HER17_RS14275	0.83	+1.2
3,209,906	-		HER17_RS14275	0.83	-0.1
3,209,975	-		HER17_RS14275	0.89	-0.1
3,209,975	-		HER17_RS14275	0.89	+1.2
3,209,993	-				+0.0
3,210,011	-				-0.5
3,210,065	+				-0.3
3,210,066	-				-0.3
3,210,077	-				-1.4
3,210,310	+				-0.7
3,210,312	+				+0.5
3,210,312	+				+0.2
3,210,371	+				-0.7
3,210,493	-				-0.4
3,210,540	+				-1.1
3,210,609	+				+1.4
3,210,610	-				-0.7
3,210,613	+				-0.2
3,210,705	-				+0.9
3,210,705	-				-0.5
3,210,728	-		HER17_RS14280	0.10	+0.2
3,210,737	+		HER17_RS14280	0.11	-0.4
3,210,737	+		HER17_RS14280	0.11	+0.3
3,210,738	-		HER17_RS14280	0.11	-1.0
3,210,766	+		HER17_RS14280	0.12	-0.0
3,210,770	+		HER17_RS14280	0.12	-0.9
3,210,771	-		HER17_RS14280	0.12	+0.1
3,210,811	-		HER17_RS14280	0.13	+0.1
3,210,881	-		HER17_RS14280	0.15	+0.4
3,210,955	+		HER17_RS14280	0.18	-0.1
3,210,995	+		HER17_RS14280	0.19	+0.3
3,210,996	-		HER17_RS14280	0.19	+0.4
3,211,016	-		HER17_RS14280	0.20	+0.5
3,211,016	-		HER17_RS14280	0.20	+0.3
3,211,016	-		HER17_RS14280	0.20	+0.1