Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS13405

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,969,808	+		HER17_RS13395	0.21	+0.3
2,969,808	+		HER17_RS13395	0.21	+0.3
2,969,808	+		HER17_RS13395	0.21	-0.3
2,969,808	+		HER17_RS13395	0.21	-0.3
2,969,808	+		HER17_RS13395	0.21	+1.4
2,969,809	-		HER17_RS13395	0.21	-0.2
2,969,809	-		HER17_RS13395	0.21	+0.4
2,969,809	-		HER17_RS13395	0.21	-0.8
2,969,809	-		HER17_RS13395	0.21	-0.9
2,970,055	+		HER17_RS13395	0.71	+0.1
2,970,056	-		HER17_RS13395	0.71	+0.6
2,970,056	-		HER17_RS13395	0.71	+0.4
2,970,140	+		HER17_RS13395	0.88	-0.2
2,970,187	+				-0.2
2,970,187	+				+0.4
2,970,188	-				-0.2
2,970,188	-				+0.5
2,970,199	+				+0.2
2,970,199	+				+1.0
2,970,199	+				-0.8
2,970,199	+				-1.5
2,970,200	-				-0.5
2,970,200	-				+0.7
2,970,213	+				+0.0
2,970,214	-				-0.4
2,970,398	-		HER17_RS13400	0.35	-0.1
2,970,494	-		HER17_RS13400	0.53	+0.4
2,970,573	+		HER17_RS13400	0.68	+0.2
2,970,574	-		HER17_RS13400	0.69	+0.7
2,970,574	-		HER17_RS13400	0.69	+0.1
2,970,749	+				-0.0
2,971,006	+		HER17_RS13405	0.24	+0.8
2,971,013	+		HER17_RS13405	0.24	-0.7
2,971,013	+		HER17_RS13405	0.24	+0.3
2,971,014	-		HER17_RS13405	0.25	+0.3
2,971,111	-		HER17_RS13405	0.34	+0.1
2,971,197	+		HER17_RS13405	0.43	-0.8
2,971,198	-		HER17_RS13405	0.43	-0.2
2,971,198	-		HER17_RS13405	0.43	+0.6
2,971,198	-		HER17_RS13405	0.43	+0.1
2,971,198	-		HER17_RS13405	0.43	+0.0
2,971,453	+		HER17_RS13405	0.69	+0.2
2,971,575	+		HER17_RS13405	0.81	-1.0
2,971,640	+		HER17_RS13405	0.88	+0.9
2,971,641	-		HER17_RS13405	0.88	+0.5
2,971,776	+				-0.0
2,971,866	+				-0.2
2,971,866	+				-1.9
2,971,867	-				-0.3
2,972,026	+				+0.0
2,972,031	+				-0.3
2,972,032	-				+0.6
2,972,046	-				-0.2
2,972,056	-				-0.3
2,972,107	+				-0.5
2,972,108	-				+0.2
2,972,108	-				-1.0
2,972,122	+				+0.3
2,972,123	-				-0.4
2,972,123	-				-0.2
2,972,147	+				+0.1
2,972,148	-				-1.3
2,972,148	-				-0.1
2,972,154	-				+0.2
2,972,154	-				-0.8
2,972,154	-				+0.4
2,972,154	-				-0.8
2,972,154	-				-0.2
2,972,156	+				-0.8
2,972,156	+				+0.1
2,972,157	-				-0.0
2,972,172	+				-0.2
2,972,183	-				-0.5
2,972,183	-				-0.2
2,972,311	+		HER17_RS13410	0.14	-1.0
2,972,312	-		HER17_RS13410	0.14	+0.2
2,972,312	-		HER17_RS13410	0.14	+0.2
2,972,437	+		HER17_RS13410	0.27	+0.8
2,972,485	-		HER17_RS13410	0.32	-0.2
2,972,485	-		HER17_RS13410	0.32	-0.2
2,972,554	-		HER17_RS13410	0.40	-0.5
2,972,554	-		HER17_RS13410	0.40	-0.3
2,972,566	-		HER17_RS13410	0.41	-0.7
2,972,627	+		HER17_RS13410	0.48	+0.3
2,972,627	+		HER17_RS13410	0.48	+0.1