Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS13125

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,913,779	-		HER17_RS13115	0.30	+0.3
2,913,815	-		HER17_RS13115	0.40	-0.5
2,913,866	+		HER17_RS13115	0.55	+0.5
2,913,866	+		HER17_RS13115	0.55	+0.6
2,913,874	+		HER17_RS13115	0.57	+0.1
2,913,874	+		HER17_RS13115	0.57	-1.5
2,913,874	+		HER17_RS13115	0.57	-1.0
2,913,874	+		HER17_RS13115	0.57	+1.1
2,913,874	+		HER17_RS13115	0.57	+0.2
2,913,875	-		HER17_RS13115	0.57	-0.2
2,913,875	-		HER17_RS13115	0.57	-0.2
2,913,951	+		HER17_RS13115	0.79	+0.5
2,913,952	-		HER17_RS13115	0.79	-0.7
2,914,059	+				+0.1
2,914,062	+				+0.4
2,914,153	+		HER17_RS13120	0.12	-0.3
2,914,207	-		HER17_RS13120	0.21	-0.3
2,914,207	-		HER17_RS13120	0.21	-0.1
2,914,229	+		HER17_RS13120	0.25	+0.3
2,914,230	-		HER17_RS13120	0.25	+0.0
2,914,261	+		HER17_RS13120	0.31	-0.4
2,914,315	+		HER17_RS13120	0.40	-0.6
2,914,315	+		HER17_RS13120	0.40	-0.7
2,914,316	-		HER17_RS13120	0.40	-0.5
2,914,345	+		HER17_RS13120	0.45	+1.0
2,914,345	+		HER17_RS13120	0.45	+0.8
2,914,346	-		HER17_RS13120	0.45	-0.0
2,914,346	-		HER17_RS13120	0.45	+0.6
2,914,362	+		HER17_RS13120	0.48	-0.2
2,914,362	+		HER17_RS13120	0.48	-0.8
2,914,363	-		HER17_RS13120	0.48	-0.6
2,914,363	-		HER17_RS13120	0.48	-0.2
2,914,369	+		HER17_RS13120	0.49	-0.5
2,914,370	-		HER17_RS13120	0.49	+0.1
2,914,370	-		HER17_RS13120	0.49	-0.5
2,914,408	+		HER17_RS13120	0.56	-1.1
2,914,408	+		HER17_RS13120	0.56	+0.5
2,914,409	-		HER17_RS13120	0.56	+0.2
2,914,409	-		HER17_RS13120	0.56	+0.5
2,914,440	+		HER17_RS13120	0.62	-0.2
2,914,455	-		HER17_RS13120	0.64	-0.1
2,914,522	-		HER17_RS13120	0.76	+0.0
2,914,528	+		HER17_RS13120	0.77	+0.1
2,914,532	-		HER17_RS13120	0.77	-1.1
2,914,551	-		HER17_RS13120	0.81	-0.6
2,914,635	-				-0.8
2,914,655	+				-2.7
2,914,655	+				-0.1
2,914,663	+				+0.1
2,914,664	-				-0.1
2,914,669	+				-1.1
2,914,669	+				-0.5
2,914,669	+				-0.5
2,914,669	+				-0.2
2,914,669	+				-0.6
2,914,670	-				-0.6
2,914,670	-				+0.7
2,914,670	-				-1.0
2,914,670	-				-1.9
2,914,670	-				-0.3
2,914,672	-				+0.0
2,914,721	+				-0.1
2,914,721	+				+0.6
2,914,722	-				+0.1
2,914,722	-				+0.4
2,914,722	-				+0.5
2,914,722	-				-0.9
2,914,767	+				-0.9
2,914,767	+				-0.2
2,914,768	-				-0.5
2,914,802	+		HER17_RS13125	0.12	-0.1
2,914,803	-		HER17_RS13125	0.12	+0.2
2,914,803	-		HER17_RS13125	0.12	-1.3
2,914,887	+		HER17_RS13125	0.20	-1.5
2,915,014	-		HER17_RS13125	0.30	-0.0
2,915,025	+		HER17_RS13125	0.31	+0.5
2,915,120	+		HER17_RS13125	0.40	+0.5
2,915,121	-		HER17_RS13125	0.40	+1.0
2,915,121	-		HER17_RS13125	0.40	+1.1
2,915,194	-		HER17_RS13125	0.46	+0.2
2,915,260	+		HER17_RS13125	0.52	-0.4
2,915,273	+		HER17_RS13125	0.53	+0.8
2,915,273	+		HER17_RS13125	0.53	+0.2
2,915,273	+		HER17_RS13125	0.53	-0.0
2,915,274	-		HER17_RS13125	0.53	+0.7
2,915,274	-		HER17_RS13125	0.53	+1.5
2,915,274	-		HER17_RS13125	0.53	-1.0
2,915,274	-		HER17_RS13125	0.53	-0.5
2,915,279	+		HER17_RS13125	0.53	+0.1
2,915,365	+		HER17_RS13125	0.61	+0.6
2,915,421	+		HER17_RS13125	0.66	-0.3
2,915,568	-		HER17_RS13125	0.78	-0.6
2,915,568	-		HER17_RS13125	0.78	-0.3
2,915,584	+		HER17_RS13125	0.80	-0.9
2,915,606	+		HER17_RS13125	0.81	-0.2
2,915,614	-		HER17_RS13125	0.82	+0.5
2,915,614	-		HER17_RS13125	0.82	-1.0
2,915,614	-		HER17_RS13125	0.82	+0.0
2,915,614	-		HER17_RS13125	0.82	+0.0
2,915,679	+		HER17_RS13125	0.88	-1.3
2,915,679	+		HER17_RS13125	0.88	-0.0
2,915,685	+		HER17_RS13125	0.88	+0.2
2,915,686	-		HER17_RS13125	0.88	+0.6
2,915,686	-		HER17_RS13125	0.88	+1.3
2,915,687	+		HER17_RS13125	0.88	-0.2
2,915,688	-		HER17_RS13125	0.89	-0.9
2,915,688	-		HER17_RS13125	0.89	+0.5
2,915,701	-		HER17_RS13125	0.90	+0.2
2,915,706	-				+0.1
2,915,706	-				+0.6
2,915,706	-				+0.3
2,915,741	+				-0.0
2,915,741	+				+0.1
2,915,841	-		HER17_RS13130	0.15	+0.0
2,915,962	+		HER17_RS13130	0.72	-0.3
2,915,963	-		HER17_RS13130	0.73	-0.1
2,915,969	-		HER17_RS13130	0.76	-0.5
2,915,999	+				+0.4
2,916,005	+				+0.8
2,916,005	+				-0.9
2,916,005	+				-0.2
2,916,005	+				-0.1
2,916,005	+				-0.7
2,916,006	-				-0.3
2,916,020	+				-0.1
2,916,020	+				-0.3
2,916,020	+				+0.2
2,916,020	+				-0.1
2,916,020	+				+0.5
2,916,021	-				+0.2
2,916,021	-				+1.3
2,916,021	-				+0.8
2,916,081	+				-0.1
2,916,210	+		HER17_RS13135	0.22	+0.2
2,916,213	+		HER17_RS13135	0.22	+0.8
2,916,265	+		HER17_RS13135	0.27	-0.7
2,916,265	+		HER17_RS13135	0.27	-0.2
2,916,266	-		HER17_RS13135	0.28	+0.1
2,916,319	+		HER17_RS13135	0.33	-0.3
2,916,319	+		HER17_RS13135	0.33	-0.1
2,916,319	+		HER17_RS13135	0.33	+0.1
2,916,320	-		HER17_RS13135	0.33	-0.2
2,916,320	-		HER17_RS13135	0.33	-0.4
2,916,320	-		HER17_RS13135	0.33	-0.3
2,916,446	+		HER17_RS13135	0.47	+0.5
2,916,447	-		HER17_RS13135	0.47	-0.2
2,916,447	-		HER17_RS13135	0.47	-0.8
2,916,535	+		HER17_RS13135	0.56	-0.1
2,916,575	+		HER17_RS13135	0.61	-0.4
2,916,575	+		HER17_RS13135	0.61	+0.9
2,916,575	+		HER17_RS13135	0.61	+0.1
2,916,575	+		HER17_RS13135	0.61	-1.2
2,916,576	-		HER17_RS13135	0.61	-0.2
2,916,576	-		HER17_RS13135	0.61	-0.4
2,916,610	+		HER17_RS13135	0.65	+0.4
2,916,610	+		HER17_RS13135	0.65	+0.2
2,916,630	+		HER17_RS13135	0.67	-0.3
2,916,631	-		HER17_RS13135	0.67	-0.2
2,916,677	+		HER17_RS13135	0.72	+0.4
2,916,698	-		HER17_RS13135	0.74	-0.4
2,916,698	-		HER17_RS13135	0.74	+0.1
2,916,764	+		HER17_RS13135	0.81	+1.5
2,916,786	+		HER17_RS13135	0.83	+1.6
2,916,787	-		HER17_RS13135	0.84	+0.1
2,916,789	+		HER17_RS13135	0.84	+0.2
2,916,790	-		HER17_RS13135	0.84	-0.6
2,916,790	-		HER17_RS13135	0.84	+0.4
2,916,792	+		HER17_RS13135	0.84	+1.1
2,916,792	+		HER17_RS13135	0.84	-0.2