Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS11770

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,614,304	+		HER17_RS11765	0.64	+0.1
2,614,305	-		HER17_RS11765	0.64	+0.3
2,614,336	-		HER17_RS11765	0.65	+0.3
2,614,336	-		HER17_RS11765	0.65	+0.1
2,614,347	+		HER17_RS11765	0.66	+0.2
2,614,347	+		HER17_RS11765	0.66	-0.9
2,614,348	-		HER17_RS11765	0.66	-2.6
2,614,348	-		HER17_RS11765	0.66	-0.1
2,614,348	-		HER17_RS11765	0.66	+0.1
2,614,348	-		HER17_RS11765	0.66	+0.8
2,614,367	-		HER17_RS11765	0.67	+0.9
2,614,380	+		HER17_RS11765	0.67	+0.1
2,614,380	+		HER17_RS11765	0.67	-0.4
2,614,381	-		HER17_RS11765	0.67	-0.3
2,614,383	+		HER17_RS11765	0.67	+1.2
2,614,383	+		HER17_RS11765	0.67	-0.4
2,614,384	-		HER17_RS11765	0.67	+0.3
2,614,384	-		HER17_RS11765	0.67	+0.9
2,614,384	-		HER17_RS11765	0.67	-0.2
2,614,405	-		HER17_RS11765	0.69	-1.4
2,614,449	+		HER17_RS11765	0.71	+0.4
2,614,450	-		HER17_RS11765	0.71	+0.3
2,614,491	+		HER17_RS11765	0.73	-2.8
2,614,491	+		HER17_RS11765	0.73	-1.2
2,614,492	-		HER17_RS11765	0.73	+0.2
2,614,494	+		HER17_RS11765	0.73	+0.4
2,614,494	+		HER17_RS11765	0.73	+0.1
2,614,494	+		HER17_RS11765	0.73	-0.3
2,614,494	+		HER17_RS11765	0.73	+0.7
2,614,639	+		HER17_RS11765	0.80	-0.2
2,614,674	+		HER17_RS11765	0.82	+0.3
2,614,675	-		HER17_RS11765	0.82	-0.5
2,614,755	+		HER17_RS11765	0.86	+0.1
2,614,756	-		HER17_RS11765	0.86	-0.4
2,614,756	-		HER17_RS11765	0.86	-0.3
2,614,756	-		HER17_RS11765	0.86	+0.1
2,614,759	+		HER17_RS11765	0.86	+0.4
2,614,764	+		HER17_RS11765	0.86	-0.0
2,614,815	+		HER17_RS11765	0.88	+1.0
2,614,816	-		HER17_RS11765	0.89	+0.1
2,614,816	-		HER17_RS11765	0.89	-0.7
2,614,816	-		HER17_RS11765	0.89	-0.2
2,614,821	-		HER17_RS11765	0.89	-0.7
2,614,829	-		HER17_RS11765	0.89	+0.2
2,614,863	+				-0.3
2,614,864	-				-1.0
2,614,864	-				+0.3
2,614,954	+				-0.1
2,614,981	-				+0.1
2,614,981	-				+0.0
2,614,981	-				-1.2
2,614,981	-				+0.3
2,615,008	+				+1.8
2,615,008	+				+0.2
2,615,008	+				+0.5
2,615,009	-				+0.9
2,615,009	-				-0.0
2,615,093	-				-0.1
2,615,136	+				+0.4
2,615,184	+				+0.0
2,615,242	+				-1.1
2,615,243	-				+0.3
2,615,243	-				-0.8
2,615,243	-				+0.0
2,615,243	-				-0.2
2,615,244	+				+0.4
2,615,245	-				-0.4
2,615,245	-				-0.9
2,615,250	+				+0.2
2,615,250	+				+0.1
2,615,251	-				-0.0
2,615,251	-				-0.2
2,615,251	-				+0.2
2,615,318	+				+0.4
2,615,430	+		HER17_RS11770	0.15	+0.3
2,615,430	+		HER17_RS11770	0.15	+0.4
2,615,430	+		HER17_RS11770	0.15	-0.4
2,615,431	-		HER17_RS11770	0.15	-0.1
2,615,431	-		HER17_RS11770	0.15	+0.2
2,615,451	-		HER17_RS11770	0.17	+0.5
2,615,644	+		HER17_RS11770	0.33	+0.5
2,615,685	-		HER17_RS11770	0.37	-1.0
2,615,685	-		HER17_RS11770	0.37	+0.2
2,615,685	-		HER17_RS11770	0.37	-0.5
2,615,706	+		HER17_RS11770	0.39	+0.4
2,615,706	+		HER17_RS11770	0.39	-0.8
2,615,706	+		HER17_RS11770	0.39	+0.5
2,615,706	+		HER17_RS11770	0.39	+0.5
2,615,707	-		HER17_RS11770	0.39	+0.8
2,615,712	+		HER17_RS11770	0.39	+0.4
2,615,713	-		HER17_RS11770	0.39	-0.4
2,615,771	+		HER17_RS11770	0.44	+0.2
2,615,771	+		HER17_RS11770	0.44	+1.0
2,615,772	-		HER17_RS11770	0.44	+1.0
2,615,788	+		HER17_RS11770	0.46	+1.2
2,615,788	+		HER17_RS11770	0.46	-0.7
2,615,867	+		HER17_RS11770	0.52	+0.6
2,615,868	-		HER17_RS11770	0.52	-0.5
2,615,868	-		HER17_RS11770	0.52	+0.0
2,616,203	-		HER17_RS11770	0.81	+0.4
2,616,291	+		HER17_RS11770	0.88	-0.9
2,616,292	-		HER17_RS11770	0.88	+1.2
2,616,292	-		HER17_RS11770	0.88	+0.0
2,616,413	+				+0.9
2,616,414	-				-0.3
2,616,414	-				+0.0
2,616,526	-				-0.4
2,616,528	+				-0.1
2,616,583	+		HER17_RS11775	0.15	-0.5
2,616,611	+		HER17_RS11775	0.20	-0.2
2,616,611	+		HER17_RS11775	0.20	+0.8
2,616,621	-		HER17_RS11775	0.21	+0.8
2,616,624	+		HER17_RS11775	0.22	+0.3
2,617,161	+				-0.0
2,617,161	+				+0.2
2,617,161	+				-0.1
2,617,161	+				+0.4
2,617,162	-				+0.6
2,617,162	-				-0.2
2,617,162	-				-0.0
2,617,165	+				+0.0
2,617,165	+				+0.6
2,617,166	-				+1.0
2,617,166	-				+0.2
2,617,166	-				-0.7
2,617,166	-				+0.5
2,617,167	+				-0.3
2,617,167	+				+0.3
2,617,168	-				-0.2
2,617,168	-				+0.2
2,617,169	+				-0.1
2,617,170	-				+0.1
2,617,170	-				-0.4
2,617,229	+				-0.6
2,617,229	+				+0.7
2,617,229	+				+0.8
2,617,229	+				+1.8
2,617,230	-				-0.5
2,617,230	-				-0.1
2,617,230	-				-0.5
2,617,230	-				-0.8
2,617,230	-				+0.1
2,617,277	-				-0.4
2,617,284	+				-0.3
2,617,284	+				+0.9
2,617,284	+				+0.2
2,617,285	-				-0.3
2,617,285	-				-0.6
2,617,376	+				-2.0
2,617,377	-				+0.3