Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS11360

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,526,834	+		HER17_RS11350	0.23	+0.5
2,526,835	-		HER17_RS11350	0.23	-0.1
2,526,878	-		HER17_RS11350	0.29	+0.9
2,526,878	-		HER17_RS11350	0.29	-0.6
2,526,890	+		HER17_RS11350	0.30	-0.7
2,526,891	-		HER17_RS11350	0.30	-0.0
2,526,911	+		HER17_RS11350	0.33	-0.1
2,527,128	-		HER17_RS11350	0.59	+0.4
2,527,128	-		HER17_RS11350	0.59	+0.2
2,527,128	-		HER17_RS11350	0.59	+0.3
2,527,130	-		HER17_RS11350	0.59	-0.1
2,527,178	+		HER17_RS11350	0.65	-0.2
2,527,178	+		HER17_RS11350	0.65	+0.4
2,527,178	+		HER17_RS11350	0.65	-0.0
2,527,182	-		HER17_RS11350	0.65	-0.5
2,527,233	+		HER17_RS11350	0.71	+0.0
2,527,233	+		HER17_RS11350	0.71	+0.1
2,527,234	-		HER17_RS11350	0.71	-0.3
2,527,234	-		HER17_RS11350	0.71	+0.2
2,527,274	+		HER17_RS11350	0.76	+0.3
2,527,289	-		HER17_RS11350	0.78	+0.6
2,527,347	+		HER17_RS11350	0.85	-0.9
2,527,348	-		HER17_RS11350	0.85	-0.4
2,527,348	-		HER17_RS11350	0.85	+0.2
2,527,374	-		HER17_RS11350	0.88	-0.1
2,527,374	-		HER17_RS11350	0.88	+0.1
2,527,398	+				-0.3
2,527,405	-				+0.1
2,527,450	+				-0.1
2,527,463	+				-1.1
2,527,464	-				+0.7
2,527,488	+				+1.5
2,527,499	+				-0.6
2,527,500	-				-0.0
2,527,520	+				+1.1
2,527,639	-		HER17_RS11355	0.29	+0.7
2,527,639	-		HER17_RS11355	0.29	+1.0
2,527,746	-		HER17_RS11355	0.80	+0.8
2,527,833	-				+0.8
2,527,833	-				+1.0
2,527,868	-		HER17_RS11360	0.33	-1.1
2,527,912	+		HER17_RS11360	0.71	-1.8
2,527,913	-		HER17_RS11360	0.72	+0.8
2,527,913	-		HER17_RS11360	0.72	+1.4
2,527,945	+				+0.0
2,527,946	-				+0.1
2,527,946	-				+0.1
2,527,947	+				+0.9
2,527,948	-				-0.1
2,527,984	-				+0.6
2,527,990	+				+0.1
2,527,990	+				+0.6
2,527,990	+				+0.3
2,527,991	-				-0.6
2,527,994	+				-0.5
2,527,994	+				-1.0
2,527,995	-				+0.6
2,527,995	-				+0.4
2,528,064	-				+0.8
2,528,090	+				+0.0
2,528,090	+				+0.1
2,528,091	-				-0.0
2,528,123	-				+0.2
2,528,123	-				-0.0
2,528,140	+				-0.6
2,528,141	-				-0.2
2,528,229	+				-1.3
2,528,240	-				+0.3
2,528,283	-				+0.5
2,528,285	-				-0.1
2,528,314	-				-0.5
2,528,314	-				+0.1
2,528,319	-				+0.3
2,528,319	-				+0.4
2,528,324	+				+0.6
2,528,345	-				+0.7
2,528,345	-				-0.6
2,528,345	-				+0.5
2,528,345	-				+1.0
2,528,345	-				-0.2
2,528,386	-				-0.3
2,528,393	-				-0.5
2,528,418	+				+0.1
2,528,419	-				+0.1
2,528,440	-				+1.0
2,528,493	+				+0.1
2,528,567	-				+0.1
2,528,616	+				+0.1
2,528,616	+				-0.1
2,528,616	+				+0.5
2,528,617	-				+0.2
2,528,617	-				+0.6
2,528,617	-				+0.3
2,528,618	+				+0.2
2,528,618	+				+1.3
2,528,618	+				+0.1
2,528,619	-				-1.2
2,528,619	-				+1.4
2,528,622	+				-0.3
2,528,622	+				-0.5
2,528,622	+				+0.1
2,528,622	+				-0.1
2,528,622	+				-2.3
2,528,622	+				-0.9
2,528,622	+				+0.7
2,528,622	+				-1.5
2,528,622	+				-0.1
2,528,622	+				-0.5
2,528,622	+				-1.8
2,528,622	+				-0.1
2,528,623	-				+0.1
2,528,623	-				-0.8
2,528,623	-				-0.3
2,528,623	-				-0.4
2,528,623	-				+0.2
2,528,623	-				+0.1
2,528,623	-				-0.2
2,528,623	-				+0.4
2,528,623	-				-1.8
2,528,623	-				+0.8
2,528,623	-				-0.2
2,528,623	-				+0.7
2,528,623	-				+0.2
2,528,623	-				-0.1
2,528,623	-				+0.5
2,528,623	-				-1.2
2,528,626	+				+0.1
2,528,626	+				-0.8
2,528,626	+				-1.2
2,528,626	+				-0.1
2,528,627	-				-0.1
2,528,627	-				+0.0
2,528,627	-				-0.0
2,528,627	-				+0.6
2,528,627	-				+0.1
2,528,627	-				+0.1
2,528,627	-				-0.1
2,528,628	+				-0.0
2,528,628	+				+0.4
2,528,628	+				+0.3
2,528,629	-				+0.3
2,528,629	-				+1.3
2,528,629	-				-0.6
2,528,629	-				-0.4
2,528,673	-				+0.4
2,528,673	-				+0.9
2,528,673	-				-1.6
2,528,678	+				+0.4
2,528,678	+				+0.1
2,528,679	-				-1.1
2,528,697	+				+0.6
2,528,715	-				+0.1
2,528,805	+				-0.1
2,528,884	-				-0.3
2,528,918	+				-0.0