Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS11205

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,496,562	+		HER17_RS11195	0.12	-0.3
2,496,562	+		HER17_RS11195	0.12	+0.8
2,496,623	+		HER17_RS11195	0.26	-1.4
2,496,670	-		HER17_RS11195	0.37	-0.4
2,496,678	+		HER17_RS11195	0.38	-1.9
2,496,678	+		HER17_RS11195	0.38	+0.8
2,496,705	-		HER17_RS11195	0.45	+0.0
2,496,754	+		HER17_RS11195	0.56	-0.4
2,496,803	+		HER17_RS11195	0.67	+0.5
2,496,809	-		HER17_RS11195	0.68	+0.8
2,496,842	+		HER17_RS11195	0.76	+0.3
2,496,874	+		HER17_RS11195	0.83	-0.3
2,497,003	+		HER17_RS11200	0.11	+0.2
2,497,050	+		HER17_RS11200	0.20	+0.0
2,497,347	-		HER17_RS11200	0.75	+0.4
2,497,406	+		HER17_RS11200	0.87	+0.1
2,497,475	+				-1.3
2,497,492	+				+0.4
2,497,506	+				+0.1
2,497,554	+				+0.3
2,497,555	-				-0.2
2,497,620	+		HER17_RS11205	0.12	+0.3
2,497,621	-		HER17_RS11205	0.12	-1.7
2,497,621	-		HER17_RS11205	0.12	+0.3
2,497,621	-		HER17_RS11205	0.12	+0.1
2,497,621	-		HER17_RS11205	0.12	-0.9
2,497,668	+		HER17_RS11205	0.17	+0.6
2,497,697	+		HER17_RS11205	0.20	+0.0
2,497,746	+		HER17_RS11205	0.26	-0.7
2,497,757	-		HER17_RS11205	0.27	-0.0
2,497,759	-		HER17_RS11205	0.27	-0.7
2,497,759	-		HER17_RS11205	0.27	+0.4
2,497,876	+		HER17_RS11205	0.40	-1.1
2,497,877	-		HER17_RS11205	0.40	+0.1
2,497,877	-		HER17_RS11205	0.40	+0.7
2,497,920	-		HER17_RS11205	0.45	+0.9
2,497,920	-		HER17_RS11205	0.45	-1.0
2,497,920	-		HER17_RS11205	0.45	-0.2
2,497,935	+		HER17_RS11205	0.47	+0.1
2,497,948	+		HER17_RS11205	0.48	-0.6
2,498,004	+		HER17_RS11205	0.54	-0.2
2,498,030	+		HER17_RS11205	0.57	+0.0
2,498,031	-		HER17_RS11205	0.57	+0.3
2,498,031	-		HER17_RS11205	0.57	-0.4
2,498,061	-		HER17_RS11205	0.61	-1.1
2,498,061	-		HER17_RS11205	0.61	-0.9
2,498,061	-		HER17_RS11205	0.61	+0.9
2,498,248	-		HER17_RS11205	0.82	-0.1
2,498,477	-				-0.6
2,498,485	+				+0.4
2,498,485	+				-0.1
2,498,486	-				+3.1
2,498,486	-				-0.7
2,498,486	-				+0.0
2,498,572	-				+0.0
2,498,573	+				-0.3
2,498,573	+				+0.9
2,498,574	-				-0.4
2,498,578	-				-0.3
2,498,624	-				+0.3
2,498,639	+				-0.8
2,498,650	+				+1.1
2,498,650	+				-0.5
2,498,650	+				-0.6
2,498,651	-				+0.4
2,498,651	-				-0.4
2,498,651	-				+1.6
2,498,651	-				-0.3
2,498,675	-				-1.2
2,498,676	+				+0.5
2,498,742	+				-0.3
2,498,743	-				-0.1
2,498,754	-				-0.4
2,498,787	-				+0.3
2,498,801	+				-0.9
2,498,849	+		HER17_RS11210	0.12	-0.1
2,498,850	-		HER17_RS11210	0.12	-0.4
2,498,859	+		HER17_RS11210	0.12	+0.0
2,498,859	+		HER17_RS11210	0.12	-0.0
2,498,859	+		HER17_RS11210	0.12	+0.3
2,498,859	+		HER17_RS11210	0.12	+0.4
2,498,860	-		HER17_RS11210	0.12	-0.7
2,498,860	-		HER17_RS11210	0.12	-0.2
2,498,876	+		HER17_RS11210	0.13	-0.3
2,498,876	+		HER17_RS11210	0.13	+0.3
2,498,877	-		HER17_RS11210	0.13	-0.2
2,498,925	-		HER17_RS11210	0.17	-0.4
2,498,925	-		HER17_RS11210	0.17	+0.2
2,498,966	-		HER17_RS11210	0.19	+1.3
2,498,987	+		HER17_RS11210	0.21	-0.0
2,499,070	+		HER17_RS11210	0.26	+0.6
2,499,070	+		HER17_RS11210	0.26	+0.4
2,499,074	+		HER17_RS11210	0.26	+0.8
2,499,075	-		HER17_RS11210	0.26	-1.9
2,499,116	+		HER17_RS11210	0.29	-0.1
2,499,137	+		HER17_RS11210	0.30	+0.5
2,499,137	+		HER17_RS11210	0.30	+0.6
2,499,138	-		HER17_RS11210	0.30	-0.3
2,499,138	-		HER17_RS11210	0.30	-0.3
2,499,138	-		HER17_RS11210	0.30	-1.0
2,499,140	-		HER17_RS11210	0.31	-0.1
2,499,140	-		HER17_RS11210	0.31	+1.1
2,499,189	+		HER17_RS11210	0.34	-1.5
2,499,190	-		HER17_RS11210	0.34	-0.9
2,499,216	-		HER17_RS11210	0.35	-2.6
2,499,230	+		HER17_RS11210	0.36	+0.8
2,499,232	+		HER17_RS11210	0.37	+0.3
2,499,233	-		HER17_RS11210	0.37	-0.4
2,499,233	-		HER17_RS11210	0.37	+0.5