Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS10885

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,431,150	-				-1.7
2,431,156	+				-0.4
2,431,157	-				-1.0
2,431,175	+				-0.1
2,431,175	+				-0.9
2,431,180	-				+0.8
2,431,180	-				+0.8
2,431,180	-				+0.3
2,431,180	-				+0.3
2,431,180	-				+0.1
2,431,232	-				+0.5
2,431,246	+				+0.9
2,431,247	-				+1.3
2,431,262	+				+0.3
2,431,262	+				-0.3
2,431,274	+				-0.7
2,431,275	-				-0.1
2,431,366	+				-0.8
2,431,367	-				-0.4
2,431,378	+				-1.0
2,431,378	+				+0.2
2,431,378	+				+0.7
2,431,378	+				+0.9
2,431,378	+				-0.7
2,431,379	-				-0.7
2,431,379	-				+0.4
2,431,380	+				-0.3
2,431,380	+				+0.1
2,431,380	+				+0.1
2,431,381	-				+0.6
2,431,381	-				+0.3
2,431,381	-				+0.3
2,431,381	-				+1.3
2,431,381	-				-0.2
2,431,411	-				+0.5
2,431,411	-				-0.5
2,431,418	+				-0.3
2,431,418	+				+0.4
2,431,419	-				-0.0
2,431,485	-		HER17_RS10880	0.22	-0.3
2,431,498	-		HER17_RS10880	0.27	-0.4
2,431,522	+		HER17_RS10880	0.36	+0.7
2,431,523	-		HER17_RS10880	0.36	+0.1
2,431,546	-		HER17_RS10880	0.44	-0.5
2,431,551	-		HER17_RS10880	0.46	-1.4
2,431,551	-		HER17_RS10880	0.46	-0.8
2,431,551	-		HER17_RS10880	0.46	-0.4
2,431,568	+		HER17_RS10880	0.53	+1.1
2,431,619	+		HER17_RS10880	0.71	-0.6
2,431,634	+		HER17_RS10880	0.77	-0.9
2,431,733	+				-0.2
2,431,741	-				-0.3
2,431,743	+				+0.3
2,431,744	-				-0.5
2,431,744	-				+0.1
2,431,744	-				+0.8
2,431,849	+				+0.5
2,431,850	-				-0.6
2,431,850	-				-0.5
2,431,850	-				-0.7
2,431,850	-				+0.4
2,431,859	-		HER17_RS10885	0.10	-0.0
2,431,860	+		HER17_RS10885	0.10	-0.5
2,431,875	-		HER17_RS10885	0.12	-1.5
2,432,111	-		HER17_RS10885	0.34	+0.0
2,432,204	-		HER17_RS10885	0.43	+0.6
2,432,210	+		HER17_RS10885	0.44	-0.1
2,432,211	-		HER17_RS10885	0.44	-0.5
2,432,232	-		HER17_RS10885	0.46	+0.4
2,432,232	-		HER17_RS10885	0.46	-0.2
2,432,260	+		HER17_RS10885	0.48	-0.6
2,432,260	+		HER17_RS10885	0.48	-1.5
2,432,260	+		HER17_RS10885	0.48	+0.4
2,432,260	+		HER17_RS10885	0.48	-0.7
2,432,260	+		HER17_RS10885	0.48	+0.2
2,432,260	+		HER17_RS10885	0.48	-0.2
2,432,260	+		HER17_RS10885	0.48	+0.9
2,432,260	+		HER17_RS10885	0.48	-0.4
2,432,261	-		HER17_RS10885	0.48	+0.4
2,432,261	-		HER17_RS10885	0.48	+1.3
2,432,261	-		HER17_RS10885	0.48	+1.0
2,432,261	-		HER17_RS10885	0.48	+0.1
2,432,261	-		HER17_RS10885	0.48	-0.5
2,432,261	-		HER17_RS10885	0.48	-0.6
2,432,263	-		HER17_RS10885	0.49	-0.2
2,432,263	-		HER17_RS10885	0.49	+0.6
2,432,393	+		HER17_RS10885	0.61	+0.4
2,432,393	+		HER17_RS10885	0.61	+0.1
2,432,394	-		HER17_RS10885	0.61	-0.3
2,432,394	-		HER17_RS10885	0.61	+1.6
2,432,490	-		HER17_RS10885	0.70	-0.1
2,432,493	+		HER17_RS10885	0.71	-0.2
2,432,493	+		HER17_RS10885	0.71	-0.5
2,432,494	-		HER17_RS10885	0.71	-0.4
2,432,494	-		HER17_RS10885	0.71	-0.7
2,432,494	-		HER17_RS10885	0.71	-0.3
2,432,542	+		HER17_RS10885	0.75	+0.2
2,432,542	+		HER17_RS10885	0.75	+0.8
2,432,543	-		HER17_RS10885	0.75	+0.1
2,432,597	-		HER17_RS10885	0.81	-0.1
2,432,597	-		HER17_RS10885	0.81	+1.9
2,432,597	-		HER17_RS10885	0.81	+0.9
2,432,650	-		HER17_RS10885	0.86	+0.9
2,432,698	+				-0.0
2,432,774	+				+0.7
2,432,824	+				-1.3
2,432,827	+				-1.7
2,432,828	-				-0.3
2,432,828	-				+0.3
2,432,828	-				-0.3
2,432,828	-				+0.1
2,432,831	+				+0.1
2,432,831	+				-2.1
2,432,831	+				-0.2
2,432,832	-				-0.3
2,432,885	+				-0.4
2,432,885	+				+0.2
2,432,885	+				+0.8
2,432,885	+				-0.5
2,432,885	+				+0.3
2,432,886	-				-0.3
2,432,892	+				+0.2
2,432,921	-				+0.8
2,432,975	-				+1.4
2,432,975	-				+0.1
2,432,975	-				-0.1
2,432,975	-				+0.8
2,433,048	-				-0.0
2,433,092	+				+0.4
2,433,092	+				-0.1
2,433,095	-				+0.2
2,433,095	-				+0.8
2,433,110	+				+1.3
2,433,111	-				-0.1
2,433,111	-				-1.5
2,433,112	+				+0.2
2,433,112	+				-0.1
2,433,112	+				-0.6
2,433,112	+				+0.5
2,433,113	-				-0.3
2,433,113	-				+0.2
2,433,113	-				-0.9
2,433,113	-				+0.5
2,433,115	-				+0.9
2,433,115	-				+0.5
2,433,144	+				-0.9
2,433,252	+		HER17_RS10890	0.12	-0.0
2,433,275	+		HER17_RS10890	0.15	+1.9
2,433,280	+		HER17_RS10890	0.16	+1.1
2,433,280	+		HER17_RS10890	0.16	+0.1
2,433,299	+		HER17_RS10890	0.18	-0.1
2,433,300	-		HER17_RS10890	0.19	+0.2
2,433,546	-		HER17_RS10890	0.51	+0.4
2,433,575	-		HER17_RS10890	0.55	+1.0
2,433,734	+		HER17_RS10890	0.75	-0.2
2,433,734	+		HER17_RS10890	0.75	+0.4
2,433,735	-		HER17_RS10890	0.76	+0.5
2,433,735	-		HER17_RS10890	0.76	-0.0
2,433,755	+		HER17_RS10890	0.78	+0.1