Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS08345

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,838,400	+		HER17_RS08335	0.52	+0.4
1,838,407	+		HER17_RS08335	0.52	-1.1
1,838,407	+		HER17_RS08335	0.52	-0.5
1,838,407	+		HER17_RS08335	0.52	-0.2
1,838,407	+		HER17_RS08335	0.52	+1.0
1,838,407	+		HER17_RS08335	0.52	+0.4
1,838,408	-		HER17_RS08335	0.52	-0.1
1,838,408	-		HER17_RS08335	0.52	-0.8
1,838,414	-		HER17_RS08335	0.53	-0.3
1,838,460	+		HER17_RS08335	0.58	+0.4
1,838,460	+		HER17_RS08335	0.58	+0.2
1,838,461	-		HER17_RS08335	0.58	-0.2
1,838,461	-		HER17_RS08335	0.58	-0.2
1,838,461	-		HER17_RS08335	0.58	+0.0
1,838,518	-		HER17_RS08335	0.64	-1.8
1,838,523	+		HER17_RS08335	0.64	-0.9
1,838,523	+		HER17_RS08335	0.64	+0.2
1,838,523	+		HER17_RS08335	0.64	+0.6
1,838,527	-		HER17_RS08335	0.65	-0.5
1,838,527	-		HER17_RS08335	0.65	-0.8
1,838,637	-		HER17_RS08335	0.76	-0.3
1,838,685	+		HER17_RS08335	0.81	-0.1
1,838,685	+		HER17_RS08335	0.81	-0.2
1,838,685	+		HER17_RS08335	0.81	+0.1
1,838,685	+		HER17_RS08335	0.81	-0.3
1,838,686	-		HER17_RS08335	0.81	-1.4
1,838,688	+		HER17_RS08335	0.81	+0.4
1,838,689	-		HER17_RS08335	0.81	-0.3
1,838,689	-		HER17_RS08335	0.81	+0.1
1,838,697	+		HER17_RS08335	0.82	-0.1
1,838,697	+		HER17_RS08335	0.82	-0.1
1,838,697	+		HER17_RS08335	0.82	-0.2
1,838,698	-		HER17_RS08335	0.82	+0.1
1,838,706	+		HER17_RS08335	0.83	-1.2
1,838,707	-		HER17_RS08335	0.83	+1.0
1,838,794	+				+0.3
1,838,795	-				+0.4
1,838,795	-				-0.3
1,838,795	-				+1.4
1,838,795	-				-1.2
1,838,803	+				+0.5
1,838,804	-				-0.2
1,838,871	-				-1.0
1,838,973	+		HER17_RS08340	0.26	+0.0
1,838,974	-		HER17_RS08340	0.26	-0.0
1,838,974	-		HER17_RS08340	0.26	+0.2
1,838,982	-		HER17_RS08340	0.28	-0.7
1,839,000	+		HER17_RS08340	0.32	-0.2
1,839,051	+		HER17_RS08340	0.43	+0.7
1,839,073	+		HER17_RS08340	0.48	+0.0
1,839,081	-		HER17_RS08340	0.50	-0.9
1,839,083	+		HER17_RS08340	0.50	+1.1
1,839,084	-		HER17_RS08340	0.50	+0.1
1,839,190	+		HER17_RS08340	0.74	+0.1
1,839,323	+				-1.7
1,839,397	+		HER17_RS08345	0.12	-0.6
1,839,413	-		HER17_RS08345	0.15	-1.0
1,839,564	+		HER17_RS08345	0.35	-0.6
1,839,569	+		HER17_RS08345	0.36	-1.4
1,839,569	+		HER17_RS08345	0.36	-0.3
1,839,570	-		HER17_RS08345	0.36	-1.0
1,839,677	-		HER17_RS08345	0.50	-0.0
1,839,680	-		HER17_RS08345	0.51	-1.0
1,839,728	-		HER17_RS08345	0.57	-3.5
1,839,826	+		HER17_RS08345	0.70	-1.2
1,839,831	-		HER17_RS08345	0.71	-0.3
1,839,952	+		HER17_RS08345	0.87	-0.3
1,839,970	-		HER17_RS08345	0.90	-0.0
1,840,168	-				+1.1
1,840,279	+		HER17_RS08350	0.12	-0.4
1,840,671	-		HER17_RS08350	0.39	-0.8