Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HER17_RS07575 and HER17_RS07580 are separated by 3 nucleotides HER17_RS07580 and HER17_RS07585 are separated by 104 nucleotides HER17_RS07585 and HER17_RS07590 are separated by 197 nucleotides
HER17_RS07575: HER17_RS07575 - DNA-binding protein, at 1,684,225 to 1,685,853
_RS07575
HER17_RS07580: HER17_RS07580 - hypothetical protein, at 1,685,857 to 1,686,255
_RS07580
HER17_RS07585: HER17_RS07585 - hypothetical protein, at 1,686,360 to 1,686,770
_RS07585
HER17_RS07590: HER17_RS07590 - hypothetical protein, at 1,686,968 to 1,687,765
_RS07590
Position (kb) 1685
1686
1687 Strain fitness (log2 ratio) -2
-1
0
1 at 1685.021 kb on + strand, within HER17_RS07575 at 1685.222 kb on + strand, within HER17_RS07575 at 1685.222 kb on + strand, within HER17_RS07575 at 1685.601 kb on - strand, within HER17_RS07575 at 1685.673 kb on + strand, within HER17_RS07575 at 1685.674 kb on - strand, within HER17_RS07575 at 1685.683 kb on + strand, within HER17_RS07575 at 1685.897 kb on + strand, within HER17_RS07580 at 1686.377 kb on - strand at 1686.492 kb on + strand, within HER17_RS07585 at 1686.502 kb on - strand, within HER17_RS07585 at 1686.573 kb on + strand, within HER17_RS07585 at 1686.641 kb on + strand, within HER17_RS07585 at 1686.708 kb on + strand, within HER17_RS07585 at 1686.778 kb on + strand at 1686.781 kb on + strand at 1686.786 kb on - strand at 1686.786 kb on - strand at 1686.819 kb on - strand at 1686.931 kb on - strand at 1687.005 kb on - strand at 1687.040 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,685,021 + HER17_RS07575 0.49 -0.2 1,685,222 + HER17_RS07575 0.61 -0.0 1,685,222 + HER17_RS07575 0.61 -0.7 1,685,601 - HER17_RS07575 0.84 -0.4 1,685,673 + HER17_RS07575 0.89 +0.3 1,685,674 - HER17_RS07575 0.89 -1.2 1,685,683 + HER17_RS07575 0.90 +0.3 1,685,897 + HER17_RS07580 0.10 +0.2 1,686,377 - +0.3 1,686,492 + HER17_RS07585 0.32 +0.5 1,686,502 - HER17_RS07585 0.35 -1.7 1,686,573 + HER17_RS07585 0.52 -2.1 1,686,641 + HER17_RS07585 0.68 -0.0 1,686,708 + HER17_RS07585 0.85 +0.8 1,686,778 + +0.6 1,686,781 + -1.5 1,686,786 - +0.6 1,686,786 - +0.3 1,686,819 - -0.6 1,686,931 - +0.0 1,687,005 - +0.2 1,687,040 - -0.2
Or see this region's nucleotide sequence