Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS07265

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,610,524	+				-0.2
1,610,525	-				+1.2
1,610,550	+				-0.6
1,610,550	+				+0.0
1,610,551	-				+0.1
1,610,584	+				-0.0
1,610,584	+				-0.7
1,610,598	+				+0.0
1,610,599	-				-0.7
1,610,622	-		HER17_RS07260	0.11	-0.2
1,610,653	-		HER17_RS07260	0.14	-0.3
1,610,678	+		HER17_RS07260	0.17	+0.3
1,610,678	+		HER17_RS07260	0.17	+1.0
1,610,678	+		HER17_RS07260	0.17	+1.1
1,610,679	-		HER17_RS07260	0.17	-1.2
1,610,722	-		HER17_RS07260	0.22	+0.2
1,610,856	+		HER17_RS07260	0.36	-0.5
1,610,856	+		HER17_RS07260	0.36	-0.0
1,610,883	+		HER17_RS07260	0.39	+0.1
1,611,126	+		HER17_RS07260	0.65	-0.7
1,611,127	-		HER17_RS07260	0.65	+0.0
1,611,160	+		HER17_RS07260	0.69	+0.0
1,611,233	+		HER17_RS07260	0.77	+0.7
1,611,233	+		HER17_RS07260	0.77	+0.2
1,611,233	+		HER17_RS07260	0.77	-0.3
1,611,233	+		HER17_RS07260	0.77	-0.2
1,611,233	+		HER17_RS07260	0.77	+1.1
1,611,233	+		HER17_RS07260	0.77	+0.1
1,611,234	-		HER17_RS07260	0.77	+1.4
1,611,234	-		HER17_RS07260	0.77	-0.5
1,611,234	-		HER17_RS07260	0.77	-0.4
1,611,296	+		HER17_RS07260	0.84	-0.3
1,611,296	+		HER17_RS07260	0.84	-1.8
1,611,297	-		HER17_RS07260	0.84	-0.6
1,611,297	-		HER17_RS07260	0.84	+1.4
1,611,312	-		HER17_RS07260	0.85	+0.2
1,611,333	+		HER17_RS07260	0.88	-0.1
1,611,333	+		HER17_RS07260	0.88	-0.2
1,611,455	+				-0.2
1,611,503	+				+0.6
1,611,570	+		HER17_RS07265	0.21	+0.8
1,611,624	+		HER17_RS07265	0.37	+0.3
1,611,715	+		HER17_RS07265	0.65	-1.1
1,611,716	-		HER17_RS07265	0.65	+1.1
1,611,716	-		HER17_RS07265	0.65	-0.6
1,611,716	-		HER17_RS07265	0.65	+0.1
1,611,716	-		HER17_RS07265	0.65	-0.2
1,611,744	+		HER17_RS07265	0.74	+0.1
1,611,744	+		HER17_RS07265	0.74	+0.2
1,611,745	-		HER17_RS07265	0.74	-1.2
1,611,748	+		HER17_RS07265	0.75	+1.2
1,611,748	+		HER17_RS07265	0.75	-0.8
1,611,749	-		HER17_RS07265	0.76	-1.1
1,611,749	-		HER17_RS07265	0.76	+0.2
1,611,749	-		HER17_RS07265	0.76	+0.1
1,611,802	+				-0.0
1,611,879	+		HER17_RS07270	0.13	+0.1
1,611,911	+		HER17_RS07270	0.22	-0.8
1,611,912	-		HER17_RS07270	0.22	-0.3
1,611,916	+		HER17_RS07270	0.23	-0.2
1,611,916	+		HER17_RS07270	0.23	+0.3
1,611,916	+		HER17_RS07270	0.23	-0.2
1,611,917	-		HER17_RS07270	0.23	+0.0
1,611,917	-		HER17_RS07270	0.23	+0.6
1,611,918	+		HER17_RS07270	0.23	+1.0
1,611,919	-		HER17_RS07270	0.24	-0.3
1,611,919	-		HER17_RS07270	0.24	+0.1
1,612,105	+		HER17_RS07270	0.75	+0.3
1,612,105	+		HER17_RS07270	0.75	-0.2
1,612,106	-		HER17_RS07270	0.75	+0.9
1,612,256	+				+0.6
1,612,293	+				-0.1
1,612,293	+				-0.6
1,612,299	+				+0.9
1,612,300	-				+1.2
1,612,300	-				+0.1
1,612,434	-				+0.1
1,612,434	-				+0.1
1,612,464	+				+0.0
1,612,477	+				+0.6
1,612,477	+				-0.2
1,612,477	+				-0.6
1,612,477	+				+0.0
1,612,491	+				+0.2
1,612,492	-				+0.3
1,612,492	-				+0.6
1,612,492	-				+0.4
1,612,521	+				+0.1
1,612,521	+				+0.4
1,612,521	+				+0.2
1,612,522	-				+1.5
1,612,522	-				-1.3
1,612,522	-				+1.3
1,612,522	-				-0.2
1,612,538	-				+0.2
1,612,539	+				+0.3
1,612,539	+				+0.6
1,612,539	+				+0.1
1,612,540	-				-0.2
1,612,540	-				+0.6
1,612,540	-				-0.5
1,612,594	+		HER17_RS07280	0.12	-0.9
1,612,594	+		HER17_RS07280	0.12	+0.0
1,612,595	-		HER17_RS07280	0.12	-0.4
1,612,822	+		HER17_RS07280	0.32	-0.2