Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS06720

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,494,527	-		HER17_RS06710	0.22	-0.6
1,494,755	+		HER17_RS06710	0.84	+0.8
1,494,755	+		HER17_RS06710	0.84	+0.0
1,494,756	-		HER17_RS06710	0.84	-0.2
1,494,758	+		HER17_RS06710	0.85	+0.6
1,494,758	+		HER17_RS06710	0.85	-0.5
1,494,795	+				-0.4
1,494,795	+				+0.0
1,494,920	-		HER17_RS06715	0.17	-0.7
1,494,973	+		HER17_RS06715	0.25	+0.1
1,495,017	+		HER17_RS06715	0.31	-0.3
1,495,017	+		HER17_RS06715	0.31	-0.6
1,495,084	+		HER17_RS06715	0.42	+1.5
1,495,084	+		HER17_RS06715	0.42	-0.0
1,495,084	+		HER17_RS06715	0.42	-0.6
1,495,085	-		HER17_RS06715	0.42	-0.3
1,495,175	-		HER17_RS06715	0.56	-0.2
1,495,284	+		HER17_RS06715	0.73	+0.3
1,495,366	+		HER17_RS06715	0.85	-0.1
1,495,366	+		HER17_RS06715	0.85	+0.4
1,495,367	-		HER17_RS06715	0.85	+0.4
1,495,607	-		HER17_RS06720	0.15	-0.2
1,495,607	-		HER17_RS06720	0.15	+0.1
1,495,613	+		HER17_RS06720	0.16	+0.6
1,495,640	+		HER17_RS06720	0.18	-0.4
1,495,640	+		HER17_RS06720	0.18	+0.2
1,495,641	-		HER17_RS06720	0.18	-0.7
1,495,770	+		HER17_RS06720	0.32	-0.1
1,495,810	-		HER17_RS06720	0.36	-0.4
1,495,929	+		HER17_RS06720	0.48	-0.2
1,495,929	+		HER17_RS06720	0.48	-0.1
1,495,929	+		HER17_RS06720	0.48	+0.1
1,495,930	-		HER17_RS06720	0.48	-0.1
1,495,930	-		HER17_RS06720	0.48	-1.2
1,495,930	-		HER17_RS06720	0.48	+0.2
1,495,930	-		HER17_RS06720	0.48	-1.5
1,495,933	+		HER17_RS06720	0.48	+0.2
1,495,934	-		HER17_RS06720	0.48	-0.5
1,495,993	-		HER17_RS06720	0.54	-1.2
1,496,027	+		HER17_RS06720	0.58	+0.3
1,496,028	-		HER17_RS06720	0.58	-1.5
1,496,059	+		HER17_RS06720	0.61	+0.3
1,496,060	-		HER17_RS06720	0.61	-0.3
1,496,070	-		HER17_RS06720	0.62	-0.2
1,496,077	+		HER17_RS06720	0.63	-0.9
1,496,077	+		HER17_RS06720	0.63	-0.2
1,496,077	+		HER17_RS06720	0.63	-0.6
1,496,112	+		HER17_RS06720	0.66	-1.1
1,496,113	-		HER17_RS06720	0.66	-0.1
1,496,259	-		HER17_RS06720	0.81	+1.0
1,496,281	-		HER17_RS06720	0.83	-1.5
1,496,303	+		HER17_RS06720	0.86	+0.4
1,496,324	+		HER17_RS06720	0.88	+0.5
1,496,324	+		HER17_RS06720	0.88	-0.4
1,496,325	-		HER17_RS06720	0.88	+0.3
1,496,367	+				+0.3
1,496,367	+				-0.3
1,496,367	+				-0.1
1,496,368	-				-0.9
1,496,368	-				-0.4
1,496,397	-				+0.5
1,496,426	-				-0.3
1,496,427	+				+0.5
1,496,427	+				-1.3
1,496,427	+				+0.5
1,496,427	+				-0.1
1,496,428	-				-0.2
1,496,428	-				-0.4
1,496,428	-				+0.3
1,496,449	+				-1.0
1,496,488	+				+0.3
1,496,488	+				-0.1
1,496,489	-				-0.8
1,496,489	-				-0.7
1,496,540	-				-0.1
1,496,617	+		HER17_RS06725	0.14	+0.0
1,496,617	+		HER17_RS06725	0.14	-0.1
1,496,617	+		HER17_RS06725	0.14	-0.1
1,496,617	+		HER17_RS06725	0.14	+0.5
1,496,618	-		HER17_RS06725	0.14	-0.8
1,496,664	-		HER17_RS06725	0.17	+0.2
1,496,692	+		HER17_RS06725	0.20	-0.7
1,496,701	-		HER17_RS06725	0.20	-1.1
1,496,907	-		HER17_RS06725	0.36	-1.1
1,496,912	-		HER17_RS06725	0.37	+0.2
1,496,930	-		HER17_RS06725	0.38	+0.9
1,497,053	+		HER17_RS06725	0.48	-0.1
1,497,053	+		HER17_RS06725	0.48	-0.7
1,497,053	+		HER17_RS06725	0.48	+0.2
1,497,071	-		HER17_RS06725	0.49	-0.1
1,497,072	+		HER17_RS06725	0.49	-1.6
1,497,072	+		HER17_RS06725	0.49	-0.3
1,497,073	-		HER17_RS06725	0.49	-0.5
1,497,073	-		HER17_RS06725	0.49	-0.5
1,497,073	-		HER17_RS06725	0.49	+1.7
1,497,073	-		HER17_RS06725	0.49	+0.1
1,497,078	+		HER17_RS06725	0.50	-0.3
1,497,078	+		HER17_RS06725	0.50	+0.0
1,497,079	-		HER17_RS06725	0.50	+1.0
1,497,114	+		HER17_RS06725	0.53	-0.7
1,497,115	-		HER17_RS06725	0.53	+0.9
1,497,190	+		HER17_RS06725	0.59	+0.1
1,497,292	-		HER17_RS06725	0.67	+0.0
1,497,381	+		HER17_RS06725	0.73	+0.1