Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS06520

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,451,361	-		HER17_RS06515	0.56	-0.9
1,451,361	-		HER17_RS06515	0.56	-1.6
1,451,361	-		HER17_RS06515	0.56	+0.0
1,451,361	-		HER17_RS06515	0.56	+0.9
1,451,361	-		HER17_RS06515	0.56	+0.9
1,451,361	-		HER17_RS06515	0.56	-0.9
1,451,395	+		HER17_RS06515	0.59	-0.1
1,451,396	-		HER17_RS06515	0.59	-0.5
1,451,432	+		HER17_RS06515	0.62	+0.5
1,451,435	+		HER17_RS06515	0.62	+0.2
1,451,435	+		HER17_RS06515	0.62	+0.5
1,451,436	-		HER17_RS06515	0.62	-1.0
1,451,436	-		HER17_RS06515	0.62	+0.3
1,451,441	-		HER17_RS06515	0.62	+0.1
1,451,441	-		HER17_RS06515	0.62	+0.3
1,451,441	-		HER17_RS06515	0.62	+0.2
1,451,504	+		HER17_RS06515	0.68	+0.4
1,451,505	-		HER17_RS06515	0.68	+0.4
1,451,505	-		HER17_RS06515	0.68	+0.2
1,451,505	-		HER17_RS06515	0.68	+0.1
1,451,505	-		HER17_RS06515	0.68	+0.4
1,451,528	-		HER17_RS06515	0.70	+0.1
1,451,624	-		HER17_RS06515	0.78	+0.4
1,452,037	+				+0.5
1,452,071	-				-0.8
1,452,091	-				-0.1
1,452,203	+				-1.3
1,452,227	+		HER17_RS06520	0.12	-0.2
1,452,322	-		HER17_RS06520	0.20	+0.5
1,452,405	+		HER17_RS06520	0.27	+0.5
1,452,465	+		HER17_RS06520	0.33	+0.4
1,452,466	-		HER17_RS06520	0.33	+0.2
1,452,478	+		HER17_RS06520	0.34	-0.0
1,452,478	+		HER17_RS06520	0.34	-0.1
1,452,479	-		HER17_RS06520	0.34	-0.0
1,452,479	-		HER17_RS06520	0.34	-0.2
1,452,749	+		HER17_RS06520	0.57	-0.3
1,452,749	+		HER17_RS06520	0.57	-0.4
1,452,750	-		HER17_RS06520	0.57	-0.9
1,452,796	+		HER17_RS06520	0.61	+0.5
1,452,796	+		HER17_RS06520	0.61	+0.4
1,452,797	-		HER17_RS06520	0.61	+0.2
1,452,797	-		HER17_RS06520	0.61	-1.2
1,452,798	+		HER17_RS06520	0.62	+0.1
1,452,798	+		HER17_RS06520	0.62	+0.3
1,452,799	-		HER17_RS06520	0.62	-0.4
1,452,889	+		HER17_RS06520	0.69	+0.3
1,453,001	+		HER17_RS06520	0.79	-1.3
1,453,074	+		HER17_RS06520	0.86	-1.7
1,453,074	+		HER17_RS06520	0.86	-0.9
1,453,075	-		HER17_RS06520	0.86	-1.2
1,453,075	-		HER17_RS06520	0.86	-0.3
1,453,075	-		HER17_RS06520	0.86	-0.3
1,453,085	-		HER17_RS06520	0.87	+0.1
1,453,085	-		HER17_RS06520	0.87	-0.0
1,453,085	-		HER17_RS06520	0.87	-2.1
1,453,085	-		HER17_RS06520	0.87	+0.3
1,453,085	-		HER17_RS06520	0.87	+0.3
1,453,259	-				-0.3
1,453,274	+				+1.3
1,453,274	+				-0.1
1,453,274	+				+0.5
1,453,276	+				+0.0
1,453,432	+		HER17_RS06525	0.20	-0.5
1,453,432	+		HER17_RS06525	0.20	-0.5
1,453,433	-		HER17_RS06525	0.20	-0.2
1,453,457	+		HER17_RS06525	0.23	+0.3
1,453,457	+		HER17_RS06525	0.23	-0.4
1,453,458	-		HER17_RS06525	0.23	-0.7
1,453,458	-		HER17_RS06525	0.23	+0.5
1,453,458	-		HER17_RS06525	0.23	-0.7
1,453,458	-		HER17_RS06525	0.23	-1.2
1,453,500	+		HER17_RS06525	0.27	+0.0
1,453,533	+		HER17_RS06525	0.31	+0.5
1,453,571	+		HER17_RS06525	0.34	-0.3
1,453,572	-		HER17_RS06525	0.35	+0.2
1,453,709	-		HER17_RS06525	0.48	-0.3
1,453,709	-		HER17_RS06525	0.48	-0.2
1,453,709	-		HER17_RS06525	0.48	+0.7
1,453,774	+		HER17_RS06525	0.55	+0.1
1,453,774	+		HER17_RS06525	0.55	+0.3
1,453,775	-		HER17_RS06525	0.55	-0.1
1,453,775	-		HER17_RS06525	0.55	-0.0
1,453,780	+		HER17_RS06525	0.56	-1.2
1,453,789	+		HER17_RS06525	0.57	-0.8
1,453,790	-		HER17_RS06525	0.57	+0.6
1,453,790	-		HER17_RS06525	0.57	-0.7
1,453,792	+		HER17_RS06525	0.57	+1.2
1,453,792	+		HER17_RS06525	0.57	-0.4
1,453,860	-		HER17_RS06525	0.64	+0.0
1,453,889	+		HER17_RS06525	0.67	-0.9
1,453,890	-		HER17_RS06525	0.67	+0.1
1,453,890	-		HER17_RS06525	0.67	+0.1
1,453,930	-		HER17_RS06525	0.71	-0.2
1,454,094	+		HER17_RS06525	0.88	+1.2
1,454,105	+		HER17_RS06525	0.89	+0.7
1,454,105	+		HER17_RS06525	0.89	+0.1
1,454,106	-		HER17_RS06525	0.89	+0.4
1,454,106	-		HER17_RS06525	0.89	+0.1
1,454,106	-		HER17_RS06525	0.89	+0.1
1,454,106	-		HER17_RS06525	0.89	-0.3
1,454,116	+		HER17_RS06525	0.90	-0.7
1,454,116	+		HER17_RS06525	0.90	-0.5
1,454,117	-				-0.1
1,454,120	+				+0.6
1,454,120	+				+0.5
1,454,120	+				-0.4
1,454,121	-				-0.7
1,454,121	-				+1.7
1,454,147	+				+0.1
1,454,147	+				-0.2
1,454,226	-				-0.2
1,454,226	-				-0.3
1,454,226	-				-0.3