Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS06080

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,348,496	-		HER17_RS06075	0.62	-0.6
1,348,496	-		HER17_RS06075	0.62	+0.4
1,348,612	+		HER17_RS06075	0.69	+0.1
1,348,638	+		HER17_RS06075	0.71	-0.2
1,348,645	-		HER17_RS06075	0.71	+0.1
1,348,789	+		HER17_RS06075	0.81	+0.2
1,348,801	+		HER17_RS06075	0.81	-0.3
1,348,801	+		HER17_RS06075	0.81	-0.3
1,348,801	+		HER17_RS06075	0.81	+0.4
1,348,802	-		HER17_RS06075	0.81	+0.1
1,348,831	-		HER17_RS06075	0.83	-0.6
1,348,954	+				-0.9
1,348,955	-				-1.5
1,348,955	-				-0.7
1,348,958	+				-0.3
1,348,959	-				+0.0
1,348,969	-				+0.2
1,348,969	-				-0.2
1,348,969	-				+0.8
1,349,016	-				-0.8
1,349,033	+				-0.1
1,349,108	+				+0.7
1,349,118	+				-0.1
1,349,118	+				-0.0
1,349,119	-				+0.6
1,349,128	-				-0.1
1,349,245	-				+1.3
1,349,278	+				+0.4
1,349,287	+				-0.2
1,349,315	+				+0.8
1,349,316	-				-1.3
1,349,375	-				-0.1
1,349,404	-				-0.3
1,349,412	+				-0.1
1,349,412	+				-0.8
1,349,426	-				-2.4
1,349,438	+				-0.0
1,349,438	+				-0.4
1,349,439	-				+0.1
1,349,442	+				-0.5
1,349,454	+				+1.1
1,349,462	+				-0.9
1,349,462	+				+0.5
1,349,462	+				-0.3
1,349,462	+				-0.7
1,349,462	+				-0.1
1,349,469	+				-0.5
1,349,470	-				-0.9
1,349,470	-				+0.5
1,349,470	-				-0.1
1,349,565	+		HER17_RS06080	0.26	+0.9
1,349,606	-		HER17_RS06080	0.35	-0.5
1,349,616	+		HER17_RS06080	0.38	+0.0
1,349,616	+		HER17_RS06080	0.38	-0.9
1,349,617	-		HER17_RS06080	0.38	+1.0
1,349,730	+		HER17_RS06080	0.64	+1.1
1,349,730	+		HER17_RS06080	0.64	-1.9
1,349,730	+		HER17_RS06080	0.64	+1.0
1,349,730	+		HER17_RS06080	0.64	+0.5
1,349,733	+		HER17_RS06080	0.65	+0.4
1,349,734	-		HER17_RS06080	0.65	+0.8
1,349,817	+		HER17_RS06080	0.84	+0.1
1,349,817	+		HER17_RS06080	0.84	+1.1
1,349,846	-				+0.6
1,349,958	-				-0.1
1,349,985	+				-0.5
1,349,985	+				-0.4
1,349,986	-				-1.0
1,349,986	-				+1.3
1,349,986	-				-0.3
1,349,990	+				-0.2
1,349,990	+				-0.3
1,349,991	-				-0.1
1,349,991	-				-0.2
1,350,008	+				-0.6
1,350,008	+				-1.9
1,350,008	+				+0.6
1,350,009	-				+0.1
1,350,039	+				+0.1
1,350,040	-				-1.9
1,350,062	+				+0.4
1,350,062	+				-0.5
1,350,062	+				-0.3
1,350,063	-				+0.1
1,350,102	+				-0.3
1,350,102	+				+0.9
1,350,103	-				+0.6
1,350,103	-				-0.9
1,350,106	-				+1.4
1,350,176	-				-0.9
1,350,182	-				-0.7
1,350,190	+				-0.3
1,350,191	-				-1.8
1,350,196	+				+0.2
1,350,374	+		HER17_RS06085	0.17	-0.4
1,350,380	+		HER17_RS06085	0.18	+0.3
1,350,380	+		HER17_RS06085	0.18	+0.3
1,350,381	-		HER17_RS06085	0.18	-0.5
1,350,416	-		HER17_RS06085	0.21	-0.8
1,350,548	+		HER17_RS06085	0.32	+0.3
1,350,549	-		HER17_RS06085	0.32	+0.0
1,350,594	+		HER17_RS06085	0.35	-0.2
1,350,595	-		HER17_RS06085	0.35	-0.4
1,350,595	-		HER17_RS06085	0.35	+0.3
1,350,595	-		HER17_RS06085	0.35	+0.1
1,350,650	-		HER17_RS06085	0.40	+0.0
1,350,740	-		HER17_RS06085	0.47	+1.0