Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS21475

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,815,293	-				+1.4
4,815,293	-				-0.0
4,815,328	-				-0.2
4,815,420	-				+0.1
4,815,423	-				-0.2
4,815,463	+				+0.5
4,815,535	+				+0.5
4,815,554	-				+0.2
4,815,554	-				+0.1
4,815,555	+				+0.3
4,815,555	+				+0.4
4,815,556	-				-0.0
4,815,556	-				-0.9
4,815,585	+				+0.3
4,815,586	-				+0.5
4,815,587	+				+0.2
4,815,587	+				-0.5
4,815,587	+				-0.0
4,815,587	+				+0.1
4,815,588	-				+0.8
4,815,623	+				+0.1
4,815,623	+				-0.1
4,815,672	-				-0.3
4,815,720	+		HER17_RS21475	0.15	-0.2
4,815,721	-		HER17_RS21475	0.15	-0.2
4,815,721	-		HER17_RS21475	0.15	+0.4
4,815,724	+		HER17_RS21475	0.16	+0.3
4,815,756	-		HER17_RS21475	0.21	+0.4
4,815,814	+		HER17_RS21475	0.30	-0.8
4,815,815	-		HER17_RS21475	0.30	+0.4
4,815,875	-		HER17_RS21475	0.40	-1.3
4,816,107	+		HER17_RS21475	0.77	-1.0
4,816,153	+		HER17_RS21475	0.84	-1.1
4,816,153	+		HER17_RS21475	0.84	-0.1
4,816,163	+		HER17_RS21475	0.86	-0.8
4,816,163	+		HER17_RS21475	0.86	+0.6
4,816,164	-		HER17_RS21475	0.86	+0.2
4,816,167	+		HER17_RS21475	0.87	+0.5
4,816,168	-		HER17_RS21475	0.87	+2.0
4,816,204	+				+0.3
4,816,205	-				+0.2
4,816,289	+				-0.2
4,816,295	+				+0.9
4,816,296	-				-0.2
4,816,296	-				+0.7
4,816,330	+				-0.9
4,816,330	+				+0.1
4,816,331	-				-0.5
4,816,334	+				+0.1
4,816,432	-		HER17_RS21480	0.16	+0.1
4,816,432	-		HER17_RS21480	0.16	-0.2
4,816,435	-		HER17_RS21480	0.16	-0.4
4,816,435	-		HER17_RS21480	0.16	+0.5
4,816,506	+		HER17_RS21480	0.24	-0.7
4,816,506	+		HER17_RS21480	0.24	-0.6
4,816,506	+		HER17_RS21480	0.24	-1.6
4,816,507	-		HER17_RS21480	0.24	+0.3
4,816,515	-		HER17_RS21480	0.24	+0.7
4,816,515	-		HER17_RS21480	0.24	-0.4
4,816,534	+		HER17_RS21480	0.26	-1.7
4,816,534	+		HER17_RS21480	0.26	-1.4
4,816,534	+		HER17_RS21480	0.26	+0.1
4,816,535	-		HER17_RS21480	0.26	+0.6
4,816,535	-		HER17_RS21480	0.26	-0.3
4,816,571	+		HER17_RS21480	0.30	-0.5
4,816,572	-		HER17_RS21480	0.30	+0.3
4,816,572	-		HER17_RS21480	0.30	-0.0
4,816,581	-		HER17_RS21480	0.31	-0.7
4,816,620	-		HER17_RS21480	0.35	-0.2
4,816,642	+		HER17_RS21480	0.37	-0.1
4,816,754	+		HER17_RS21480	0.49	+0.4
4,816,754	+		HER17_RS21480	0.49	-0.7
4,816,754	+		HER17_RS21480	0.49	+0.4
4,816,755	-		HER17_RS21480	0.49	-0.2
4,816,763	+		HER17_RS21480	0.50	+0.9
4,816,763	+		HER17_RS21480	0.50	-0.8
4,816,806	+		HER17_RS21480	0.54	-0.7
4,816,895	+		HER17_RS21480	0.63	-0.9
4,816,896	-		HER17_RS21480	0.63	-0.3
4,816,896	-		HER17_RS21480	0.63	+0.6
4,816,968	+		HER17_RS21480	0.70	+0.4
4,816,968	+		HER17_RS21480	0.70	+0.0
4,816,990	+		HER17_RS21480	0.73	+0.3
4,817,012	-		HER17_RS21480	0.75	+0.4
4,817,012	-		HER17_RS21480	0.75	+0.2
4,817,047	+		HER17_RS21480	0.78	-0.6
4,817,113	+		HER17_RS21480	0.85	+0.2
4,817,137	-		HER17_RS21480	0.87	-0.7
4,817,137	-		HER17_RS21480	0.87	-0.6
4,817,151	+		HER17_RS21480	0.89	-0.1
4,817,151	+		HER17_RS21480	0.89	-0.5
4,817,159	+		HER17_RS21480	0.90	+0.7