Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS21385

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,790,446	+				-1.8
4,791,068	+				-0.9
4,791,068	+				+0.0
4,791,068	+				-0.3
4,791,094	+				+0.1
4,791,126	+				-1.9
4,791,126	+				+0.6
4,791,134	+				-0.4
4,791,145	+				-0.7
4,791,145	+				+1.6
4,791,145	+				-0.7
4,791,145	+				-0.9
4,791,270	+		HER17_RS21380	0.49	+0.5
4,791,270	+		HER17_RS21380	0.49	-0.4
4,791,270	+		HER17_RS21380	0.49	-0.5
4,791,270	+		HER17_RS21380	0.49	-0.6
4,791,270	+		HER17_RS21380	0.49	-1.6
4,791,270	+		HER17_RS21380	0.49	+0.1
4,793,263	+		HER17_RS21385	0.87	+0.3
4,793,263	+		HER17_RS21385	0.87	+0.5
4,793,263	+		HER17_RS21385	0.87	-0.0
4,793,264	-		HER17_RS21385	0.87	-0.4
4,793,315	+		HER17_RS21385	0.90	+1.2
4,793,316	-		HER17_RS21385	0.90	+0.1
4,793,378	+				-0.8
4,793,416	+				+0.7
4,793,419	-				-0.4
4,793,419	-				+0.3
4,793,419	-				-0.3
4,793,468	+				-0.6
4,793,468	+				-1.0
4,793,469	-				-0.7
4,793,472	-				+1.0
4,793,472	-				-0.1
4,793,517	-				+0.8
4,793,527	-				+0.4
4,793,549	+				-0.1
4,793,550	-				-0.9
4,793,557	+				-0.1
4,793,558	-				+0.7
4,793,558	-				-0.7
4,793,558	-				-0.7
4,793,559	+				-0.4
4,793,618	-		HER17_RS21390	0.12	-0.6
4,793,731	+		HER17_RS21390	0.28	+0.8
4,793,732	-		HER17_RS21390	0.29	-1.0
4,793,737	+		HER17_RS21390	0.29	-0.0
4,793,737	+		HER17_RS21390	0.29	+0.7
4,793,737	+		HER17_RS21390	0.29	+1.3
4,793,737	+		HER17_RS21390	0.29	-0.8
4,793,769	+		HER17_RS21390	0.34	-0.3
4,793,769	+		HER17_RS21390	0.34	-0.7
4,793,769	+		HER17_RS21390	0.34	-0.4
4,793,769	+		HER17_RS21390	0.34	+0.2
4,793,769	+		HER17_RS21390	0.34	-0.5
4,793,769	+		HER17_RS21390	0.34	+0.3
4,793,769	+		HER17_RS21390	0.34	+0.2
4,793,769	+		HER17_RS21390	0.34	+0.6
4,793,770	-		HER17_RS21390	0.34	-0.8
4,793,770	-		HER17_RS21390	0.34	-0.9
4,793,770	-		HER17_RS21390	0.34	-0.8
4,793,770	-		HER17_RS21390	0.34	+0.7
4,793,770	-		HER17_RS21390	0.34	-0.4
4,793,861	+		HER17_RS21390	0.47	+0.7
4,793,862	-		HER17_RS21390	0.47	-0.3
4,793,878	+		HER17_RS21390	0.50	-0.3
4,793,878	+		HER17_RS21390	0.50	-0.3
4,793,879	-		HER17_RS21390	0.50	-0.8
4,793,879	-		HER17_RS21390	0.50	-0.0
4,793,879	-		HER17_RS21390	0.50	-1.3
4,793,908	+		HER17_RS21390	0.54	+0.1
4,793,908	+		HER17_RS21390	0.54	-0.9
4,793,909	-		HER17_RS21390	0.54	-0.6
4,794,008	+		HER17_RS21390	0.68	-1.5
4,794,009	-		HER17_RS21390	0.69	-0.2
4,794,009	-		HER17_RS21390	0.69	-1.4
4,794,009	-		HER17_RS21390	0.69	-1.4
4,794,009	-		HER17_RS21390	0.69	-0.1
4,794,009	-		HER17_RS21390	0.69	-0.3
4,794,009	-		HER17_RS21390	0.69	-0.7
4,794,009	-		HER17_RS21390	0.69	+1.3
4,794,044	+		HER17_RS21390	0.74	-0.5
4,794,044	+		HER17_RS21390	0.74	+0.2
4,794,044	+		HER17_RS21390	0.74	-1.4
4,794,045	-		HER17_RS21390	0.74	-0.6
4,794,181	-				+1.0
4,794,181	-				-0.2
4,794,261	+				+0.4
4,794,261	+				-0.2
4,794,261	+				-0.3
4,794,262	-				-0.6
4,794,267	+				-1.1
4,794,268	-				+0.3
4,794,344	+				-1.1
4,794,344	+				-0.8
4,794,344	+				-0.7
4,794,344	+				-1.1
4,794,345	-				-1.0
4,794,345	-				-0.6
4,794,345	-				-0.4
4,794,345	-				-1.3
4,794,345	-				-0.7
4,794,366	+				-2.1
4,794,381	+				-0.7
4,794,382	-				-1.1
4,794,402	+				-0.4
4,794,402	+				-0.7
4,794,403	-				+1.3
4,794,406	+				-0.9
4,794,406	+				-0.0
4,794,406	+				-0.1
4,794,406	+				-1.3
4,794,406	+				-1.4
4,794,406	+				-0.2
4,794,406	+				-1.1
4,794,406	+				-0.3
4,794,407	-				+0.6
4,794,407	-				+0.0
4,794,407	-				-0.8
4,794,407	-				+0.1
4,794,407	-				-0.3
4,794,407	-				-0.8
4,794,407	-				-1.2
4,794,407	-				-1.4
4,794,407	-				-1.0
4,794,407	-				-1.0
4,794,407	-				-0.8
4,794,407	-				-0.9
4,794,407	-				-0.8
4,794,407	-				-1.9
4,794,407	-				-0.4
4,794,407	-				+0.4
4,794,442	-		HER17_RS21395	0.10	-0.1