Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS20625

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,620,333	-		HER17_RS20620	0.32	+0.4
4,620,341	-		HER17_RS20620	0.32	+0.7
4,620,374	+		HER17_RS20620	0.35	+0.9
4,620,566	+		HER17_RS20620	0.49	-0.1
4,620,567	-		HER17_RS20620	0.49	-0.3
4,620,567	-		HER17_RS20620	0.49	+2.1
4,620,601	+		HER17_RS20620	0.51	-0.2
4,620,715	+		HER17_RS20620	0.60	+0.9
4,620,715	+		HER17_RS20620	0.60	-0.1
4,620,715	+		HER17_RS20620	0.60	+0.4
4,620,757	-		HER17_RS20620	0.63	-0.3
4,620,757	-		HER17_RS20620	0.63	-0.8
4,620,800	+		HER17_RS20620	0.66	+0.5
4,620,801	-		HER17_RS20620	0.66	+0.1
4,620,801	-		HER17_RS20620	0.66	+1.0
4,620,810	+		HER17_RS20620	0.66	+1.1
4,620,950	-		HER17_RS20620	0.77	+0.1
4,621,015	+		HER17_RS20620	0.81	-0.0
4,621,015	+		HER17_RS20620	0.81	+0.8
4,621,016	-		HER17_RS20620	0.81	-0.5
4,621,016	-		HER17_RS20620	0.81	+1.1
4,621,016	-		HER17_RS20620	0.81	+0.0
4,621,065	-		HER17_RS20620	0.85	-0.1
4,621,213	+				-0.1
4,621,213	+				-0.1
4,621,214	-				+0.1
4,621,222	+				-0.1
4,621,247	-				+1.1
4,621,247	-				+0.6
4,621,277	+				-0.1
4,621,277	+				-0.1
4,621,277	+				-0.7
4,621,278	-				-0.2
4,621,291	+				+0.1
4,621,292	-				+0.2
4,621,334	+				-0.0
4,621,334	+				+0.6
4,621,334	+				+0.4
4,621,335	-				+0.6
4,621,335	-				+0.1
4,621,381	+				+0.4
4,621,382	-				-0.6
4,621,461	+		HER17_RS20625	0.16	+0.8
4,621,546	-		HER17_RS20625	0.27	+0.5
4,621,663	-		HER17_RS20625	0.42	+0.4
4,621,674	+		HER17_RS20625	0.44	-0.4
4,621,675	-		HER17_RS20625	0.44	-0.0
4,621,765	+		HER17_RS20625	0.56	-0.5
4,621,765	+		HER17_RS20625	0.56	+0.4
4,621,765	+		HER17_RS20625	0.56	-0.4
4,621,765	+		HER17_RS20625	0.56	-0.1
4,621,765	+		HER17_RS20625	0.56	-0.3
4,621,766	-		HER17_RS20625	0.56	+0.3
4,621,766	-		HER17_RS20625	0.56	-0.3
4,621,804	+		HER17_RS20625	0.61	-0.3
4,621,804	+		HER17_RS20625	0.61	-1.1
4,621,804	+		HER17_RS20625	0.61	-0.2
4,621,805	-		HER17_RS20625	0.61	-0.6
4,621,805	-		HER17_RS20625	0.61	+1.2
4,621,887	+		HER17_RS20625	0.71	-0.0
4,622,021	+		HER17_RS20625	0.89	-0.2
4,622,022	-		HER17_RS20625	0.89	-0.0
4,622,026	+		HER17_RS20625	0.89	-0.4
4,622,026	+		HER17_RS20625	0.89	-1.9
4,622,026	+		HER17_RS20625	0.89	+0.0
4,622,027	-		HER17_RS20625	0.89	-0.2
4,622,027	-		HER17_RS20625	0.89	+0.9
4,622,083	+				-0.7
4,622,084	-				+2.2
4,622,084	-				-0.0
4,622,084	-				+0.4
4,622,091	+				-0.1
4,622,092	-				+0.4
4,622,107	+				+0.3
4,622,107	+				-0.1
4,622,108	-				-0.6
4,622,108	-				-0.3
4,622,108	-				+0.1
4,622,138	+				-0.0
4,622,146	-				+0.4
4,622,146	-				+0.1
4,622,228	-				+0.1
4,622,332	-		HER17_RS20630	0.19	-1.3
4,622,332	-		HER17_RS20630	0.19	-0.6
4,622,359	-		HER17_RS20630	0.21	+0.0
4,622,370	+		HER17_RS20630	0.22	-0.3
4,622,370	+		HER17_RS20630	0.22	-1.2
4,622,422	+		HER17_RS20630	0.28	+0.3
4,622,422	+		HER17_RS20630	0.28	+0.2
4,622,422	+		HER17_RS20630	0.28	+0.7
4,622,423	-		HER17_RS20630	0.28	+0.4
4,622,575	+		HER17_RS20630	0.43	+0.3
4,622,720	+		HER17_RS20630	0.57	+0.2
4,622,796	+		HER17_RS20630	0.65	+0.1
4,622,796	+		HER17_RS20630	0.65	-2.0
4,622,796	+		HER17_RS20630	0.65	-0.1
4,622,796	+		HER17_RS20630	0.65	-0.3
4,622,799	+		HER17_RS20630	0.65	+0.2
4,622,800	-		HER17_RS20630	0.65	-0.7
4,622,970	-		HER17_RS20630	0.82	-0.2
4,623,006	-		HER17_RS20630	0.86	-0.1
4,623,006	-		HER17_RS20630	0.86	-0.0
4,623,090	+				+0.2
4,623,090	+				+0.2
4,623,091	-				-0.0